RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 TNXBP22105 4242 aa2.1□□□□□ -2.07
SORT1-209ENST00000538502 MT1MQ8N339 61 aa2.09□□□□□ -2.07
SORT1-209ENST00000538502 LPAP08519 4548 aa2.07□□□□□ -2.08
SORT1-209ENST00000538502 LCE2DQ5TA82 110 aaPredicted RBP2.06□□□□□ -2.08
SORT1-209ENST00000538502 KRTAP4-7Q9BYR0 210 aa2.06□□□□□ -2.08
SORT1-209ENST00000538502 MT1AP04731 61 aa2.05□□□□□ -2.08
SORT1-209ENST00000538502 KRTAP19-6Q3LI70 58 aa2□□□□□ -2.09
SORT1-209ENST00000538502 FLGP20930 4061 aaPredicted RBP1.98□□□□□ -2.09
SORT1-209ENST00000538502 FAT4Q6V0I7 4981 aa1.98□□□□□ -2.09
SORT1-209ENST00000538502 LOC100996750A0A140TA64 210 aa1.97□□□□□ -2.09
SORT1-209ENST00000538502 MT4P47944 62 aa1.97□□□□□ -2.09
SORT1-209ENST00000538502 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
SORT1-209ENST00000538502 KRTAP9-6A0A140TA67 174 aa1.95□□□□□ -2.1
SORT1-209ENST00000538502 KRTAP9-7A8MTY7 169 aa1.95□□□□□ -2.1
SORT1-209ENST00000538502 KRTAP19-7Q3SYF9 63 aa1.94□□□□□ -2.1
SORT1-209ENST00000538502 LCE1DQ5T752 114 aa1.94□□□□□ -2.1
SORT1-209ENST00000538502 LCE4AQ5TA78 99 aa1.91□□□□□ -2.1
SORT1-209ENST00000538502 MUC2Q02817 5179 aa1.91□□□□□ -2.1
SORT1-209ENST00000538502 KRTAP4-3Q9BYR4 195 aa1.9□□□□□ -2.11
SORT1-209ENST00000538502 USH2AO75445 5202 aa1.89□□□□□ -2.11
SORT1-209ENST00000538502 KRTAP6-2Q3LI66 62 aa1.89□□□□□ -2.11
SORT1-209ENST00000538502 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
SORT1-209ENST00000538502 KRTAP9-4Q9BYQ2 154 aa1.86□□□□□ -2.11
SORT1-209ENST00000538502 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.11
SORT1-209ENST00000538502 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.12
SORT1-209ENST00000538502 LCE1AQ5T7P2 110 aa1.84□□□□□ -2.12
SORT1-209ENST00000538502 LCE5AQ5TCM9 118 aa1.84□□□□□ -2.12
SORT1-209ENST00000538502 KRTAP4-9Q9BYQ8 210 aa1.83□□□□□ -2.12
SORT1-209ENST00000538502 KRTAP9-2Q9BYQ4 174 aa1.81□□□□□ -2.12
SORT1-209ENST00000538502 LCE2AQ5TA79 106 aaPredicted RBP1.8□□□□□ -2.12
SORT1-209ENST00000538502 KRTAP9-6A8MVA2 160 aa1.8□□□□□ -2.12
SORT1-209ENST00000538502 KRTAP6-1Q3LI64 71 aa1.8□□□□□ -2.12
SORT1-209ENST00000538502 SYNE1Q8NF91 8797 aaKnown RBP1.79□□□□□ -2.12
SORT1-209ENST00000538502 SSPOA2VEC9 5147 aa1.77□□□□□ -2.13
SORT1-209ENST00000538502 LCE1CQ5T751 118 aa1.75□□□□□ -2.13
SORT1-209ENST00000538502 LCE1EQ5T753 118 aa1.75□□□□□ -2.13
SORT1-209ENST00000538502 LCE1FQ5T754 118 aa1.75□□□□□ -2.13
SORT1-209ENST00000538502 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
SORT1-209ENST00000538502 KRTAP2-2Q9BYT5 123 aa1.74□□□□□ -2.13
SORT1-209ENST00000538502 SYNE2Q8WXH0 6885 aaKnown RBP1.69□□□□□ -2.14
SORT1-209ENST00000538502 KRTAP6-3Q3LI67 103 aa1.69□□□□□ -2.14
SORT1-209ENST00000538502 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
SORT1-209ENST00000538502 KRTAP4-2Q9BYR5 136 aa1.65□□□□□ -2.15
SORT1-209ENST00000538502 KRTAP9-9Q9BYP9 154 aa1.63□□□□□ -2.15
SORT1-209ENST00000538502 KMT2DO14686 5537 aa1.62□□□□□ -2.15
SORT1-209ENST00000538502 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.61□□□□□ -2.15
SORT1-209ENST00000538502 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.16
SORT1-209ENST00000538502 FCGBPQ9Y6R7 5405 aaPredicted RBP1.58□□□□□ -2.16
SORT1-209ENST00000538502 DSTQ03001 7570 aaKnown RBP1.54□□□□□ -2.16
SORT1-209ENST00000538502 KRTAP4-11Q9BYQ6 195 aa1.53□□□□□ -2.16
SORT1-209ENST00000538502 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
SORT1-209ENST00000538502 KRTAP4-4Q9BYR3 166 aa1.5□□□□□ -2.17
SORT1-209ENST00000538502 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
SORT1-209ENST00000538502 KRTAP5-5Q701N2 237 aaPredicted RBP1.44□□□□□ -2.18
SORT1-209ENST00000538502 KRTAP5-9P26371 169 aa1.43□□□□□ -2.18
SORT1-209ENST00000538502 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
SORT1-209ENST00000538502 NEBP20929 6669 aa1.4□□□□□ -2.18
SORT1-209ENST00000538502 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
SORT1-209ENST00000538502 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
SORT1-209ENST00000538502 KRTAP4-6Q9BYQ5 205 aa1.36□□□□□ -2.19
SORT1-209ENST00000538502 MUC19Q7Z5P9 8384 aa1.34□□□□□ -2.19
SORT1-209ENST00000538502 MACF1Q9UPN3 7388 aaKnown RBP1.34□□□□□ -2.2
SORT1-209ENST00000538502 AHNAK2Q8IVF2 5795 aa1.33□□□□□ -2.2
SORT1-209ENST00000538502 KRTAP4-12Q9BQ66 201 aa1.28□□□□□ -2.21
SORT1-209ENST00000538502 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
SORT1-209ENST00000538502 KRTAP5-2Q701N4 177 aa1.16□□□□□ -2.22
SORT1-209ENST00000538502 KRTAP5-3Q6L8H2 238 aa1.16□□□□□ -2.22
SORT1-209ENST00000538502 PHGR1C9JFL3 82 aa1.15□□□□□ -2.23
SORT1-209ENST00000538502 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
SORT1-209ENST00000538502 KRTAP5-1Q6L8H4 278 aa1.08□□□□□ -2.24
SORT1-209ENST00000538502 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.04□□□□□ -2.24
SORT1-209ENST00000538502 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SORT1-209ENST00000538502 KRTAP5-11Q6L8G4 156 aa0.98□□□□□ -2.25
SORT1-209ENST00000538502 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
SORT1-209ENST00000538502 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
SORT1-209ENST00000538502 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
SORT1-209ENST00000538502 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 7.7 ms