RNA–Protein interactions for RNA: ENST00000538307.1

SH2B3-202, Transcript of SH2B adaptor protein 3, humanhuman

TSL 2 BASIC

Gene SH2B3, Length 2,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-202ENST00000538307 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
SH2B3-202ENST00000538307 MT1EP04732 61 aa5.85□□□□□ -1.47
SH2B3-202ENST00000538307 MT1LQ93083 61 aa5.84□□□□□ -1.47
SH2B3-202ENST00000538307 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
SH2B3-202ENST00000538307 MACF1Q9UPN3 7388 aaKnown RBP5.73□□□□□ -1.49
SH2B3-202ENST00000538307 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
SH2B3-202ENST00000538307 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
SH2B3-202ENST00000538307 KRTAP2-1Q9BYU5 128 aa5.73□□□□□ -1.49
SH2B3-202ENST00000538307 SYNE2Q8WXH0 6885 aaKnown RBP5.61□□□□□ -1.51
SH2B3-202ENST00000538307 SPRR2FQ96RM1 72 aa5.59□□□□□ -1.52
SH2B3-202ENST00000538307 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
SH2B3-202ENST00000538307 KRTAP5-9P26371 169 aa5.51□□□□□ -1.53
SH2B3-202ENST00000538307 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
SH2B3-202ENST00000538307 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
SH2B3-202ENST00000538307 KRTAP19-3Q7Z4W3 81 aa5.47□□□□□ -1.53
SH2B3-202ENST00000538307 MT1MQ8N339 61 aa5.47□□□□□ -1.53
SH2B3-202ENST00000538307 MT1GP13640 62 aa5.46□□□□□ -1.54
SH2B3-202ENST00000538307 MUC12Q9UKN1 5478 aa5.4□□□□□ -1.54
SH2B3-202ENST00000538307 SPRR2EP22531 72 aa5.35□□□□□ -1.55
SH2B3-202ENST00000538307 SPRR2BP35325 72 aa5.35□□□□□ -1.55
SH2B3-202ENST00000538307 SPRR2AP35326 72 aa5.35□□□□□ -1.55
SH2B3-202ENST00000538307 LCE1AQ5T7P2 110 aa5.33□□□□□ -1.56
SH2B3-202ENST00000538307 LCE5AQ5TCM9 118 aa5.3□□□□□ -1.56
SH2B3-202ENST00000538307 NEBP20929 6669 aa5.28□□□□□ -1.56
SH2B3-202ENST00000538307 MDN1Q9NU22 5596 aa5.26□□□□□ -1.57
SH2B3-202ENST00000538307 SPRR2DP22532 72 aa5.16□□□□□ -1.58
SH2B3-202ENST00000538307 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
SH2B3-202ENST00000538307 KRTAP20-1Q3LI63 56 aa5.05□□□□□ -1.6
SH2B3-202ENST00000538307 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
SH2B3-202ENST00000538307 LCE3BQ5TA77 95 aa5.01□□□□□ -1.61
SH2B3-202ENST00000538307 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.62
SH2B3-202ENST00000538307 KRTAP6-1Q3LI64 71 aa4.95□□□□□ -1.62
SH2B3-202ENST00000538307 MT1AP04731 61 aa4.92□□□□□ -1.62
SH2B3-202ENST00000538307 KRTAP4-9Q9BYQ8 210 aa4.9□□□□□ -1.63
SH2B3-202ENST00000538307 KRTAP5-5Q701N2 237 aaPredicted RBP4.85□□□□□ -1.63
SH2B3-202ENST00000538307 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
SH2B3-202ENST00000538307 SYNE1Q8NF91 8797 aaKnown RBP4.77□□□□□ -1.65
SH2B3-202ENST00000538307 LCE3DQ9BYE3 92 aa4.74□□□□□ -1.65
SH2B3-202ENST00000538307 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
SH2B3-202ENST00000538307 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
SH2B3-202ENST00000538307 KRTAP5-4Q6L8H1 288 aa4.57□□□□□ -1.68
SH2B3-202ENST00000538307 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
SH2B3-202ENST00000538307 MT4P47944 62 aa4.49□□□□□ -1.69
SH2B3-202ENST00000538307 PRM1P04553 51 aa4.44□□□□□ -1.7
SH2B3-202ENST00000538307 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
SH2B3-202ENST00000538307 MT3P25713 68 aa4.41□□□□□ -1.7
SH2B3-202ENST00000538307 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
SH2B3-202ENST00000538307 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
SH2B3-202ENST00000538307 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
SH2B3-202ENST00000538307 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
SH2B3-202ENST00000538307 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
SH2B3-202ENST00000538307 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.74
SH2B3-202ENST00000538307 KRTAP5-3Q6L8H2 238 aa4.13□□□□□ -1.75
SH2B3-202ENST00000538307 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
SH2B3-202ENST00000538307 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
SH2B3-202ENST00000538307 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
SH2B3-202ENST00000538307 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
SH2B3-202ENST00000538307 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
SH2B3-202ENST00000538307 KRTAP5-7Q6L8G8 165 aa3.78□□□□□ -1.8
SH2B3-202ENST00000538307 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
SH2B3-202ENST00000538307 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
SH2B3-202ENST00000538307 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
SH2B3-202ENST00000538307 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
SH2B3-202ENST00000538307 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
SH2B3-202ENST00000538307 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
SH2B3-202ENST00000538307 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
SH2B3-202ENST00000538307 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
SH2B3-202ENST00000538307 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
SH2B3-202ENST00000538307 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
SH2B3-202ENST00000538307 KRTAP21-2Q3LI59 83 aa3.21□□□□□ -1.9
SH2B3-202ENST00000538307 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
SH2B3-202ENST00000538307 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
SH2B3-202ENST00000538307 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
SH2B3-202ENST00000538307 KRTAP21-1Q3LI58 79 aa2.81□□□□□ -1.96
SH2B3-202ENST00000538307 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
SH2B3-202ENST00000538307 PHGR1C9JFL3 82 aa2.59□□□□□ -2
SH2B3-202ENST00000538307 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 85.3 ms