RNA–Protein interactions for RNA: ENST00000537869.5

SNHG1-205, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 1,038 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-205ENST00000537869 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
SNHG1-205ENST00000537869 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
SNHG1-205ENST00000537869 Q5VSD8 79 aa1.85□□□□□ -2.11
SNHG1-205ENST00000537869 MUC2Q02817 5179 aa1.85□□□□□ -2.11
SNHG1-205ENST00000537869 LRP2P98164 4655 aa1.84□□□□□ -2.12
SNHG1-205ENST00000537869 CRIPTQ9P021 101 aa1.82□□□□□ -2.12
SNHG1-205ENST00000537869 LPAP08519 4548 aa1.81□□□□□ -2.12
SNHG1-205ENST00000537869 S4R3F8 94 aa1.81□□□□□ -2.12
SNHG1-205ENST00000537869 RNF213Q63HN8 5207 aa1.8□□□□□ -2.12
SNHG1-205ENST00000537869 M0QZ58 72 aa1.8□□□□□ -2.12
SNHG1-205ENST00000537869 MT1HL1P0DM35 61 aa1.79□□□□□ -2.12
SNHG1-205ENST00000537869 A0A0D9SG42 100 aa1.78□□□□□ -2.12
SNHG1-205ENST00000537869 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
SNHG1-205ENST00000537869 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
SNHG1-205ENST00000537869 C10orf95Q9H7T3 257 aa1.74□□□□□ -2.13
SNHG1-205ENST00000537869 MUC17Q685J3 4493 aa1.73□□□□□ -2.13
SNHG1-205ENST00000537869 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
SNHG1-205ENST00000537869 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
SNHG1-205ENST00000537869 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
SNHG1-205ENST00000537869 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
SNHG1-205ENST00000537869 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
SNHG1-205ENST00000537869 INE1O15225 51 aa1.65□□□□□ -2.15
SNHG1-205ENST00000537869 FLGP20930 4061 aaPredicted RBP1.63□□□□□ -2.15
SNHG1-205ENST00000537869 KRTAP4-1Q9BYQ7 146 aa1.63□□□□□ -2.15
SNHG1-205ENST00000537869 NEBP20929 6669 aa1.6□□□□□ -2.15
SNHG1-205ENST00000537869 TNP1P09430 55 aa1.58□□□□□ -2.16
SNHG1-205ENST00000537869 KRTAP19-2Q3LHN2 52 aa1.58□□□□□ -2.16
SNHG1-205ENST00000537869 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
SNHG1-205ENST00000537869 USH2AO75445 5202 aa1.51□□□□□ -2.17
SNHG1-205ENST00000537869 MACF1Q9UPN3 7388 aaKnown RBP1.51□□□□□ -2.17
SNHG1-205ENST00000537869 MT1HP80294 61 aa1.5□□□□□ -2.17
SNHG1-205ENST00000537869 SPRR2GQ9BYE4 73 aa1.5□□□□□ -2.17
SNHG1-205ENST00000537869 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
SNHG1-205ENST00000537869 M0R2T5 61 aa1.47□□□□□ -2.17
SNHG1-205ENST00000537869 KRTAP8-1Q8IUC2 63 aa1.46□□□□□ -2.18
SNHG1-205ENST00000537869 KRTAP19-8Q3LI54 63 aa1.44□□□□□ -2.18
SNHG1-205ENST00000537869 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
SNHG1-205ENST00000537869 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
SNHG1-205ENST00000537869 MT2AP02795 61 aa1.43□□□□□ -2.18
SNHG1-205ENST00000537869 MT1FP04733 61 aa1.43□□□□□ -2.18
SNHG1-205ENST00000537869 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
SNHG1-205ENST00000537869 MT1BP07438 61 aa1.37□□□□□ -2.19
SNHG1-205ENST00000537869 MT1XP80297 61 aa1.37□□□□□ -2.19
SNHG1-205ENST00000537869 MUC12Q9UKN1 5478 aa1.34□□□□□ -2.2
SNHG1-205ENST00000537869 AHNAKQ09666 5890 aaKnown RBP1.32□□□□□ -2.2
SNHG1-205ENST00000537869 KMT2DO14686 5537 aa1.32□□□□□ -2.2
SNHG1-205ENST00000537869 KRTAP19-6Q3LI70 58 aa1.31□□□□□ -2.2
SNHG1-205ENST00000537869 KRTAP2-3P0C7H8 128 aa1.29□□□□□ -2.2
SNHG1-205ENST00000537869 KRTAP19-5Q3LI72 72 aa1.29□□□□□ -2.2
SNHG1-205ENST00000537869 KRTAP2-4Q9BYR9 128 aa1.29□□□□□ -2.2
SNHG1-205ENST00000537869 KRTAP2-1Q9BYU5 128 aa1.29□□□□□ -2.2
SNHG1-205ENST00000537869 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
SNHG1-205ENST00000537869 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
SNHG1-205ENST00000537869 DSTQ03001 7570 aaKnown RBP1.23□□□□□ -2.21
SNHG1-205ENST00000537869 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
SNHG1-205ENST00000537869 MT1LQ93083 61 aa1.21□□□□□ -2.22
SNHG1-205ENST00000537869 MT1EP04732 61 aa1.2□□□□□ -2.22
SNHG1-205ENST00000537869 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
SNHG1-205ENST00000537869 SPRR2FQ96RM1 72 aa1.15□□□□□ -2.23
SNHG1-205ENST00000537869 MT1GP13640 62 aa1.13□□□□□ -2.23
SNHG1-205ENST00000537869 MT1AP04731 61 aa1.12□□□□□ -2.23
SNHG1-205ENST00000537869 SPRR2EP22531 72 aa1.12□□□□□ -2.23
SNHG1-205ENST00000537869 SPRR2BP35325 72 aa1.12□□□□□ -2.23
SNHG1-205ENST00000537869 SPRR2AP35326 72 aa1.12□□□□□ -2.23
SNHG1-205ENST00000537869 MUC5ACP98088 5654 aa1.11□□□□□ -2.23
SNHG1-205ENST00000537869 MT1MQ8N339 61 aa1.11□□□□□ -2.23
SNHG1-205ENST00000537869 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
SNHG1-205ENST00000537869 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
SNHG1-205ENST00000537869 SPRR2DP22532 72 aa1.08□□□□□ -2.24
SNHG1-205ENST00000537869 KRTAP6-1Q3LI64 71 aa1□□□□□ -2.25
SNHG1-205ENST00000537869 PRM1P04553 51 aa0.98□□□□□ -2.25
SNHG1-205ENST00000537869 MT4P47944 62 aa0.96□□□□□ -2.26
SNHG1-205ENST00000537869 SYNE1Q8NF91 8797 aaKnown RBP0.95□□□□□ -2.26
SNHG1-205ENST00000537869 KRTAP6-2Q3LI66 62 aa0.94□□□□□ -2.26
SNHG1-205ENST00000537869 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
SNHG1-205ENST00000537869 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
SNHG1-205ENST00000537869 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 24.2 ms