RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
GGA3-201ENST00000537686 SPRR2DP22532 72 aa3.38□□□□□ -1.87
GGA3-201ENST00000537686 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
GGA3-201ENST00000537686 KRTAP4-7Q9BYR0 210 aa3.38□□□□□ -1.87
GGA3-201ENST00000537686 KRTAP12-4P60329 112 aa3.35□□□□□ -1.87
GGA3-201ENST00000537686 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
GGA3-201ENST00000537686 MT1LQ93083 61 aa3.34□□□□□ -1.88
GGA3-201ENST00000537686 MT1EP04732 61 aa3.33□□□□□ -1.88
GGA3-201ENST00000537686 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
GGA3-201ENST00000537686 KMT2DO14686 5537 aa3.3□□□□□ -1.88
GGA3-201ENST00000537686 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
GGA3-201ENST00000537686 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
GGA3-201ENST00000537686 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
GGA3-201ENST00000537686 MT1MQ8N339 61 aa3.21□□□□□ -1.9
GGA3-201ENST00000537686 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
GGA3-201ENST00000537686 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
GGA3-201ENST00000537686 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
GGA3-201ENST00000537686 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
GGA3-201ENST00000537686 KRTAP9-6A0A140TA67 174 aa3.14□□□□□ -1.91
GGA3-201ENST00000537686 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
GGA3-201ENST00000537686 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
GGA3-201ENST00000537686 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
GGA3-201ENST00000537686 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
GGA3-201ENST00000537686 MACF1Q9UPN3 7388 aaKnown RBP3.1□□□□□ -1.91
GGA3-201ENST00000537686 MUC12Q9UKN1 5478 aa3.09□□□□□ -1.92
GGA3-201ENST00000537686 MT3P25713 68 aa3.04□□□□□ -1.92
GGA3-201ENST00000537686 MT4P47944 62 aa3.04□□□□□ -1.92
GGA3-201ENST00000537686 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.01□□□□□ -1.93
GGA3-201ENST00000537686 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
GGA3-201ENST00000537686 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
GGA3-201ENST00000537686 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
GGA3-201ENST00000537686 MT1AP04731 61 aa2.95□□□□□ -1.94
GGA3-201ENST00000537686 KRTAP9-7A8MTY7 169 aa2.93□□□□□ -1.94
GGA3-201ENST00000537686 KRTAP4-9Q9BYQ8 210 aa2.92□□□□□ -1.94
GGA3-201ENST00000537686 PRM1P04553 51 aa2.89□□□□□ -1.95
GGA3-201ENST00000537686 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
GGA3-201ENST00000537686 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
GGA3-201ENST00000537686 KRTAP5-9P26371 169 aa2.87□□□□□ -1.95
GGA3-201ENST00000537686 MDN1Q9NU22 5596 aa2.84□□□□□ -1.95
GGA3-201ENST00000537686 KRTAP6-1Q3LI64 71 aa2.81□□□□□ -1.96
GGA3-201ENST00000537686 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
GGA3-201ENST00000537686 KRTAP20-1Q3LI63 56 aa2.74□□□□□ -1.97
GGA3-201ENST00000537686 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
GGA3-201ENST00000537686 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
GGA3-201ENST00000537686 KRTAP2-2Q9BYT5 123 aa2.64□□□□□ -1.99
GGA3-201ENST00000537686 LCE4AQ5TA78 99 aa2.63□□□□□ -1.99
GGA3-201ENST00000537686 NEBP20929 6669 aa2.63□□□□□ -1.99
GGA3-201ENST00000537686 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
GGA3-201ENST00000537686 KRTAP5-5Q701N2 237 aaPredicted RBP2.49□□□□□ -2.01
GGA3-201ENST00000537686 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
GGA3-201ENST00000537686 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
GGA3-201ENST00000537686 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
GGA3-201ENST00000537686 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
GGA3-201ENST00000537686 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
GGA3-201ENST00000537686 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
GGA3-201ENST00000537686 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
GGA3-201ENST00000537686 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
GGA3-201ENST00000537686 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
GGA3-201ENST00000537686 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
GGA3-201ENST00000537686 KRTAP5-3Q6L8H2 238 aa2.11□□□□□ -2.07
GGA3-201ENST00000537686 KRTAP5-2Q701N4 177 aa2.11□□□□□ -2.07
GGA3-201ENST00000537686 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
GGA3-201ENST00000537686 KRTAP4-12Q9BQ66 201 aa2.05□□□□□ -2.08
GGA3-201ENST00000537686 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
GGA3-201ENST00000537686 AHNAK2Q8IVF2 5795 aa2.03□□□□□ -2.08
GGA3-201ENST00000537686 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
GGA3-201ENST00000537686 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
GGA3-201ENST00000537686 KRTAP5-10Q6L8G5 202 aa1.85□□□□□ -2.11
GGA3-201ENST00000537686 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
GGA3-201ENST00000537686 AHNAKQ09666 5890 aaKnown RBP1.69□□□□□ -2.14
GGA3-201ENST00000537686 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
GGA3-201ENST00000537686 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
GGA3-201ENST00000537686 KRTAP5-11Q6L8G4 156 aa1.64□□□□□ -2.15
GGA3-201ENST00000537686 KRTAP5-7Q6L8G8 165 aa1.64□□□□□ -2.15
GGA3-201ENST00000537686 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
GGA3-201ENST00000537686 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
GGA3-201ENST00000537686 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms