RNA–Protein interactions for RNA: ENST00000537440.5

TRIT1-214, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5 BASIC

Gene TRIT1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-214ENST00000537440 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
TRIT1-214ENST00000537440 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
TRIT1-214ENST00000537440 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
TRIT1-214ENST00000537440 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
TRIT1-214ENST00000537440 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
TRIT1-214ENST00000537440 SPRR2FQ96RM1 72 aa4.9□□□□□ -1.62
TRIT1-214ENST00000537440 MT1GP13640 62 aa4.87□□□□□ -1.63
TRIT1-214ENST00000537440 MT1MQ8N339 61 aa4.84□□□□□ -1.63
TRIT1-214ENST00000537440 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
TRIT1-214ENST00000537440 MUC12Q9UKN1 5478 aa4.82□□□□□ -1.64
TRIT1-214ENST00000537440 KRTAP4-3Q9BYR4 195 aa4.8□□□□□ -1.64
TRIT1-214ENST00000537440 LCE5AQ5TCM9 118 aa4.77□□□□□ -1.65
TRIT1-214ENST00000537440 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
TRIT1-214ENST00000537440 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
TRIT1-214ENST00000537440 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
TRIT1-214ENST00000537440 SYNE2Q8WXH0 6885 aaKnown RBP4.72□□□□□ -1.65
TRIT1-214ENST00000537440 KRTAP5-9P26371 169 aa4.71□□□□□ -1.66
TRIT1-214ENST00000537440 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
TRIT1-214ENST00000537440 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.6□□□□□ -1.67
TRIT1-214ENST00000537440 SPRR2EP22531 72 aa4.58□□□□□ -1.68
TRIT1-214ENST00000537440 SPRR2BP35325 72 aa4.58□□□□□ -1.68
TRIT1-214ENST00000537440 SPRR2AP35326 72 aa4.58□□□□□ -1.68
TRIT1-214ENST00000537440 MDN1Q9NU22 5596 aa4.54□□□□□ -1.68
TRIT1-214ENST00000537440 KRTAP6-3Q3LI67 103 aa4.51□□□□□ -1.69
TRIT1-214ENST00000537440 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.7
TRIT1-214ENST00000537440 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
TRIT1-214ENST00000537440 SPRR2DP22532 72 aa4.41□□□□□ -1.7
TRIT1-214ENST00000537440 KRTAP5-5Q701N2 237 aaPredicted RBP4.32□□□□□ -1.72
TRIT1-214ENST00000537440 MT1AP04731 61 aa4.31□□□□□ -1.72
TRIT1-214ENST00000537440 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
TRIT1-214ENST00000537440 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
TRIT1-214ENST00000537440 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
TRIT1-214ENST00000537440 NEBP20929 6669 aa4.2□□□□□ -1.74
TRIT1-214ENST00000537440 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
TRIT1-214ENST00000537440 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
TRIT1-214ENST00000537440 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
TRIT1-214ENST00000537440 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
TRIT1-214ENST00000537440 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
TRIT1-214ENST00000537440 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
TRIT1-214ENST00000537440 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
TRIT1-214ENST00000537440 LCE1DQ5T752 114 aa3.94□□□□□ -1.78
TRIT1-214ENST00000537440 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
TRIT1-214ENST00000537440 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
TRIT1-214ENST00000537440 MT3P25713 68 aa3.9□□□□□ -1.79
TRIT1-214ENST00000537440 KRTAP4-2Q9BYR5 136 aa3.89□□□□□ -1.79
TRIT1-214ENST00000537440 KRTAP20-1Q3LI63 56 aa3.88□□□□□ -1.79
TRIT1-214ENST00000537440 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
TRIT1-214ENST00000537440 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
TRIT1-214ENST00000537440 MT4P47944 62 aa3.84□□□□□ -1.79
TRIT1-214ENST00000537440 KRTAP2-2Q9BYT5 123 aa3.84□□□□□ -1.79
TRIT1-214ENST00000537440 PRM1P04553 51 aa3.76□□□□□ -1.81
TRIT1-214ENST00000537440 KRTAP20-2Q3LI61 65 aa3.75□□□□□ -1.81
TRIT1-214ENST00000537440 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
TRIT1-214ENST00000537440 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
TRIT1-214ENST00000537440 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
TRIT1-214ENST00000537440 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
TRIT1-214ENST00000537440 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
TRIT1-214ENST00000537440 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
TRIT1-214ENST00000537440 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
TRIT1-214ENST00000537440 LCE1BQ5T7P3 118 aa3.17□□□□□ -1.9
TRIT1-214ENST00000537440 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
TRIT1-214ENST00000537440 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
TRIT1-214ENST00000537440 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
TRIT1-214ENST00000537440 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
TRIT1-214ENST00000537440 LCE1CQ5T751 118 aa3.09□□□□□ -1.92
TRIT1-214ENST00000537440 KRTAP5-8O75690 187 aa3.05□□□□□ -1.92
TRIT1-214ENST00000537440 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
TRIT1-214ENST00000537440 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
TRIT1-214ENST00000537440 KRTAP21-2Q3LI59 83 aa2.79□□□□□ -1.96
TRIT1-214ENST00000537440 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
TRIT1-214ENST00000537440 MUC5BQ9HC84 5762 aaPredicted RBP2.67□□□□□ -1.98
TRIT1-214ENST00000537440 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
TRIT1-214ENST00000537440 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
TRIT1-214ENST00000537440 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
TRIT1-214ENST00000537440 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
TRIT1-214ENST00000537440 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
TRIT1-214ENST00000537440 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 858.8 ms