RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
USP44-203ENST00000537435 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
USP44-203ENST00000537435 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
USP44-203ENST00000537435 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
USP44-203ENST00000537435 MT1GP13640 62 aa4.65□□□□□ -1.67
USP44-203ENST00000537435 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.67
USP44-203ENST00000537435 MT1MQ8N339 61 aa4.64□□□□□ -1.67
USP44-203ENST00000537435 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
USP44-203ENST00000537435 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
USP44-203ENST00000537435 KRTAP4-6Q9BYQ5 205 aa4.48□□□□□ -1.69
USP44-203ENST00000537435 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
USP44-203ENST00000537435 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
USP44-203ENST00000537435 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
USP44-203ENST00000537435 MACF1Q9UPN3 7388 aaKnown RBP4.35□□□□□ -1.71
USP44-203ENST00000537435 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
USP44-203ENST00000537435 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
USP44-203ENST00000537435 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
USP44-203ENST00000537435 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
USP44-203ENST00000537435 SYNE2Q8WXH0 6885 aaKnown RBP4.17□□□□□ -1.74
USP44-203ENST00000537435 MT1AP04731 61 aa4.17□□□□□ -1.74
USP44-203ENST00000537435 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
USP44-203ENST00000537435 SYNE1Q8NF91 8797 aaKnown RBP4.15□□□□□ -1.74
USP44-203ENST00000537435 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
USP44-203ENST00000537435 KRTAP5-9P26371 169 aa4.14□□□□□ -1.75
USP44-203ENST00000537435 KRTAP9-2Q9BYQ4 174 aa4.11□□□□□ -1.75
USP44-203ENST00000537435 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
USP44-203ENST00000537435 SPRR2EP22531 72 aa4.06□□□□□ -1.76
USP44-203ENST00000537435 SPRR2BP35325 72 aa4.06□□□□□ -1.76
USP44-203ENST00000537435 SPRR2AP35326 72 aa4.06□□□□□ -1.76
USP44-203ENST00000537435 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
USP44-203ENST00000537435 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
USP44-203ENST00000537435 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
USP44-203ENST00000537435 SPRR2DP22532 72 aa3.89□□□□□ -1.79
USP44-203ENST00000537435 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
USP44-203ENST00000537435 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
USP44-203ENST00000537435 KRTAP9-6A0A140TA67 174 aa3.85□□□□□ -1.79
USP44-203ENST00000537435 PRM1P04553 51 aa3.83□□□□□ -1.8
USP44-203ENST00000537435 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
USP44-203ENST00000537435 KRTAP6-3Q3LI67 103 aa3.76□□□□□ -1.81
USP44-203ENST00000537435 MT3P25713 68 aa3.75□□□□□ -1.81
USP44-203ENST00000537435 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
USP44-203ENST00000537435 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
USP44-203ENST00000537435 KRTAP9-9Q9BYP9 154 aa3.67□□□□□ -1.82
USP44-203ENST00000537435 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
USP44-203ENST00000537435 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
USP44-203ENST00000537435 NEBP20929 6669 aa3.45□□□□□ -1.86
USP44-203ENST00000537435 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
USP44-203ENST00000537435 MT4P47944 62 aa3.44□□□□□ -1.86
USP44-203ENST00000537435 KRTAP20-2Q3LI61 65 aa3.38□□□□□ -1.87
USP44-203ENST00000537435 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
USP44-203ENST00000537435 KRTAP5-2Q701N4 177 aa3.36□□□□□ -1.87
USP44-203ENST00000537435 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
USP44-203ENST00000537435 KRTAP5-3Q6L8H2 238 aa3.3□□□□□ -1.88
USP44-203ENST00000537435 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
USP44-203ENST00000537435 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
USP44-203ENST00000537435 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
USP44-203ENST00000537435 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
USP44-203ENST00000537435 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
USP44-203ENST00000537435 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
USP44-203ENST00000537435 KRTAP5-10Q6L8G5 202 aa2.96□□□□□ -1.94
USP44-203ENST00000537435 KRTAP5-1Q6L8H4 278 aa2.92□□□□□ -1.94
USP44-203ENST00000537435 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
USP44-203ENST00000537435 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
USP44-203ENST00000537435 KRTAP21-2Q3LI59 83 aa2.71□□□□□ -1.97
USP44-203ENST00000537435 KRTAP5-8O75690 187 aa2.66□□□□□ -1.98
USP44-203ENST00000537435 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
USP44-203ENST00000537435 KRTAP4-4Q9BYR3 166 aa2.49□□□□□ -2.01
USP44-203ENST00000537435 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
USP44-203ENST00000537435 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
USP44-203ENST00000537435 KRTAP21-1Q3LI58 79 aa2.4□□□□□ -2.03
USP44-203ENST00000537435 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
USP44-203ENST00000537435 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
USP44-203ENST00000537435 PHGR1C9JFL3 82 aa2.14□□□□□ -2.07
USP44-203ENST00000537435 GPR98Q8WXG9 6306 aa2.07□□□□□ -2.08
USP44-203ENST00000537435 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
USP44-203ENST00000537435 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
USP44-203ENST00000537435 MUC16Q8WXI7 14507 aa1.45□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 49.3 ms