RNA–Protein interactions for RNA: ENST00000536072.6

EDC4-202, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 2

Gene EDC4, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-202ENST00000536072 MUC12Q9UKN1 5478 aa5.65□□□□□ -1.5
EDC4-202ENST00000536072 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
EDC4-202ENST00000536072 MACF1Q9UPN3 7388 aaKnown RBP5.59□□□□□ -1.52
EDC4-202ENST00000536072 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
EDC4-202ENST00000536072 KRTAP4-3Q9BYR4 195 aa5.56□□□□□ -1.52
EDC4-202ENST00000536072 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
EDC4-202ENST00000536072 MT1MQ8N339 61 aa5.52□□□□□ -1.53
EDC4-202ENST00000536072 MT1GP13640 62 aa5.51□□□□□ -1.53
EDC4-202ENST00000536072 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
EDC4-202ENST00000536072 LOC100996750A0A140TA64 210 aa5.45□□□□□ -1.54
EDC4-202ENST00000536072 LCE5AQ5TCM9 118 aa5.42□□□□□ -1.54
EDC4-202ENST00000536072 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
EDC4-202ENST00000536072 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
EDC4-202ENST00000536072 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
EDC4-202ENST00000536072 KRTAP2-1Q9BYU5 128 aa5.39□□□□□ -1.55
EDC4-202ENST00000536072 DSTQ03001 7570 aaKnown RBP5.31□□□□□ -1.56
EDC4-202ENST00000536072 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
EDC4-202ENST00000536072 KRTAP5-9P26371 169 aa5.26□□□□□ -1.57
EDC4-202ENST00000536072 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.57
EDC4-202ENST00000536072 SPRR2EP22531 72 aa5.13□□□□□ -1.59
EDC4-202ENST00000536072 SPRR2BP35325 72 aa5.13□□□□□ -1.59
EDC4-202ENST00000536072 SPRR2AP35326 72 aa5.13□□□□□ -1.59
EDC4-202ENST00000536072 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
EDC4-202ENST00000536072 KRTAP6-3Q3LI67 103 aa4.98□□□□□ -1.61
EDC4-202ENST00000536072 KRTAP9-6A0A140TA67 174 aa4.97□□□□□ -1.61
EDC4-202ENST00000536072 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
EDC4-202ENST00000536072 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
EDC4-202ENST00000536072 SPRR2DP22532 72 aa4.92□□□□□ -1.62
EDC4-202ENST00000536072 KRTAP5-5Q701N2 237 aaPredicted RBP4.92□□□□□ -1.62
EDC4-202ENST00000536072 MT1AP04731 61 aa4.91□□□□□ -1.62
EDC4-202ENST00000536072 SYNE1Q8NF91 8797 aaKnown RBP4.79□□□□□ -1.64
EDC4-202ENST00000536072 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
EDC4-202ENST00000536072 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
EDC4-202ENST00000536072 NEBP20929 6669 aa4.67□□□□□ -1.66
EDC4-202ENST00000536072 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
EDC4-202ENST00000536072 KRTAP9-7A8MTY7 169 aa4.62□□□□□ -1.67
EDC4-202ENST00000536072 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
EDC4-202ENST00000536072 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
EDC4-202ENST00000536072 KRTAP5-4Q6L8H1 288 aa4.48□□□□□ -1.69
EDC4-202ENST00000536072 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
EDC4-202ENST00000536072 MT3P25713 68 aa4.42□□□□□ -1.7
EDC4-202ENST00000536072 KRTAP4-6Q9BYQ5 205 aa4.34□□□□□ -1.71
EDC4-202ENST00000536072 MT4P47944 62 aa4.34□□□□□ -1.72
EDC4-202ENST00000536072 PRM1P04553 51 aa4.3□□□□□ -1.72
EDC4-202ENST00000536072 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
EDC4-202ENST00000536072 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
EDC4-202ENST00000536072 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
EDC4-202ENST00000536072 KRTAP2-2Q9BYT5 123 aa4.22□□□□□ -1.73
EDC4-202ENST00000536072 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
EDC4-202ENST00000536072 LCE1DQ5T752 114 aa4.15□□□□□ -1.75
EDC4-202ENST00000536072 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
EDC4-202ENST00000536072 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
EDC4-202ENST00000536072 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
EDC4-202ENST00000536072 LCE1EQ5T753 118 aa3.7□□□□□ -1.82
EDC4-202ENST00000536072 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
EDC4-202ENST00000536072 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
EDC4-202ENST00000536072 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
EDC4-202ENST00000536072 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
EDC4-202ENST00000536072 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
EDC4-202ENST00000536072 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
EDC4-202ENST00000536072 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
EDC4-202ENST00000536072 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
EDC4-202ENST00000536072 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
EDC4-202ENST00000536072 KRTAP5-7Q6L8G8 165 aa3.31□□□□□ -1.88
EDC4-202ENST00000536072 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.26□□□□□ -1.89
EDC4-202ENST00000536072 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
EDC4-202ENST00000536072 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
EDC4-202ENST00000536072 MUC5BQ9HC84 5762 aaPredicted RBP3.03□□□□□ -1.92
EDC4-202ENST00000536072 KRTAP5-11Q6L8G4 156 aa3.03□□□□□ -1.92
EDC4-202ENST00000536072 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
EDC4-202ENST00000536072 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
EDC4-202ENST00000536072 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
EDC4-202ENST00000536072 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
EDC4-202ENST00000536072 KRTAP21-1Q3LI58 79 aa2.78□□□□□ -1.97
EDC4-202ENST00000536072 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
EDC4-202ENST00000536072 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
EDC4-202ENST00000536072 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
EDC4-202ENST00000536072 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms