RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 PSPHP1O15172 72 aa4.73□□□□□ -1.65
CCS-209ENST00000534763 LCE3BQ5TA77 95 aa4.73□□□□□ -1.65
CCS-209ENST00000534763 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
CCS-209ENST00000534763 K7ERS5 55 aa4.7□□□□□ -1.66
CCS-209ENST00000534763 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
CCS-209ENST00000534763 MT1GP13640 62 aa4.67□□□□□ -1.66
CCS-209ENST00000534763 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
CCS-209ENST00000534763 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
CCS-209ENST00000534763 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
CCS-209ENST00000534763 MT1LQ93083 61 aa4.61□□□□□ -1.67
CCS-209ENST00000534763 A6NED7 52 aa4.6□□□□□ -1.67
CCS-209ENST00000534763 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
CCS-209ENST00000534763 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
CCS-209ENST00000534763 MT1MQ8N339 61 aa4.55□□□□□ -1.68
CCS-209ENST00000534763 CDC42SE1Q9NRR8 79 aa4.46□□□□□ -1.7
CCS-209ENST00000534763 ROMO1P60602 79 aa4.39□□□□□ -1.71
CCS-209ENST00000534763 KRTAP4-3Q9BYR4 195 aa4.38□□□□□ -1.71
CCS-209ENST00000534763 LCE4AQ5TA78 99 aa4.35□□□□□ -1.71
CCS-209ENST00000534763 KRTAP4-7Q9BYR0 210 aa4.33□□□□□ -1.72
CCS-209ENST00000534763 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
CCS-209ENST00000534763 KRTAP15-1Q3LI76 137 aa4.31□□□□□ -1.72
CCS-209ENST00000534763 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
CCS-209ENST00000534763 LCE1DQ5T752 114 aa4.27□□□□□ -1.73
CCS-209ENST00000534763 HMCN1Q96RW7 5635 aa4.22□□□□□ -1.73
CCS-209ENST00000534763 MT4P47944 62 aa4.21□□□□□ -1.74
CCS-209ENST00000534763 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
CCS-209ENST00000534763 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
CCS-209ENST00000534763 KRTAP5-5Q701N2 237 aaPredicted RBP4.19□□□□□ -1.74
CCS-209ENST00000534763 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
CCS-209ENST00000534763 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
CCS-209ENST00000534763 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
CCS-209ENST00000534763 LOC100996750A0A140TA64 210 aa4.1□□□□□ -1.75
CCS-209ENST00000534763 BRK1Q8WUW1 75 aa4.1□□□□□ -1.75
CCS-209ENST00000534763 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
CCS-209ENST00000534763 KRTAP12-4P60329 112 aa4.05□□□□□ -1.76
CCS-209ENST00000534763 KRTAP9-4Q9BYQ2 154 aa4.04□□□□□ -1.76
CCS-209ENST00000534763 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
CCS-209ENST00000534763 AHNAK2Q8IVF2 5795 aa4□□□□□ -1.77
CCS-209ENST00000534763 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
CCS-209ENST00000534763 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
CCS-209ENST00000534763 KRTAP4-12Q9BQ66 201 aa3.96□□□□□ -1.78
CCS-209ENST00000534763 PMAIP1Q13794 54 aa3.95□□□□□ -1.78
CCS-209ENST00000534763 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
CCS-209ENST00000534763 MT1AP04731 61 aa3.93□□□□□ -1.78
CCS-209ENST00000534763 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
CCS-209ENST00000534763 KRTAP5-3Q6L8H2 238 aa3.91□□□□□ -1.78
CCS-209ENST00000534763 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
CCS-209ENST00000534763 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
CCS-209ENST00000534763 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
CCS-209ENST00000534763 KRTAP5-7Q6L8G8 165 aa3.77□□□□□ -1.81
CCS-209ENST00000534763 NDUFAF8A1L188 74 aa3.75□□□□□ -1.81
CCS-209ENST00000534763 KRTAP6-2Q3LI66 62 aa3.68□□□□□ -1.82
CCS-209ENST00000534763 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
CCS-209ENST00000534763 MT3P25713 68 aa3.61□□□□□ -1.83
CCS-209ENST00000534763 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
CCS-209ENST00000534763 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
CCS-209ENST00000534763 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
CCS-209ENST00000534763 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
CCS-209ENST00000534763 MUC5ACP98088 5654 aa3.28□□□□□ -1.88
CCS-209ENST00000534763 MUC5BQ9HC84 5762 aaPredicted RBP3.27□□□□□ -1.89
CCS-209ENST00000534763 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
CCS-209ENST00000534763 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
CCS-209ENST00000534763 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
CCS-209ENST00000534763 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
CCS-209ENST00000534763 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
CCS-209ENST00000534763 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CCS-209ENST00000534763 LCE3DQ9BYE3 92 aa3.06□□□□□ -1.92
CCS-209ENST00000534763 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CCS-209ENST00000534763 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
CCS-209ENST00000534763 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
CCS-209ENST00000534763 INE1O15225 51 aa2.66□□□□□ -1.98
CCS-209ENST00000534763 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
CCS-209ENST00000534763 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
CCS-209ENST00000534763 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
CCS-209ENST00000534763 PRM1P04553 51 aa2.22□□□□□ -2.05
CCS-209ENST00000534763 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
CCS-209ENST00000534763 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CCS-209ENST00000534763 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms