RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MUC12Q9UKN1 5478 aa6.46□□□□□ -1.38
CAPN1-226ENST00000533820 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
CAPN1-226ENST00000533820 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
CAPN1-226ENST00000533820 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
CAPN1-226ENST00000533820 MT1GP13640 62 aa6.35□□□□□ -1.39
CAPN1-226ENST00000533820 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
CAPN1-226ENST00000533820 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
CAPN1-226ENST00000533820 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
CAPN1-226ENST00000533820 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
CAPN1-226ENST00000533820 MT1MQ8N339 61 aa6.16□□□□□ -1.42
CAPN1-226ENST00000533820 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
CAPN1-226ENST00000533820 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
CAPN1-226ENST00000533820 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
CAPN1-226ENST00000533820 SPRR2FQ96RM1 72 aa6.01□□□□□ -1.45
CAPN1-226ENST00000533820 MACF1Q9UPN3 7388 aaKnown RBP5.97□□□□□ -1.45
CAPN1-226ENST00000533820 LCE3BQ5TA77 95 aa5.94□□□□□ -1.46
CAPN1-226ENST00000533820 KRTAP4-9Q9BYQ8 210 aa5.91□□□□□ -1.46
CAPN1-226ENST00000533820 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
CAPN1-226ENST00000533820 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
CAPN1-226ENST00000533820 MDN1Q9NU22 5596 aa5.76□□□□□ -1.49
CAPN1-226ENST00000533820 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
CAPN1-226ENST00000533820 KRTAP6-1Q3LI64 71 aa5.69□□□□□ -1.5
CAPN1-226ENST00000533820 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
CAPN1-226ENST00000533820 PRM1P04553 51 aa5.65□□□□□ -1.51
CAPN1-226ENST00000533820 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
CAPN1-226ENST00000533820 LCE1AQ5T7P2 110 aa5.63□□□□□ -1.51
CAPN1-226ENST00000533820 KRTAP9-6A0A140TA67 174 aa5.54□□□□□ -1.52
CAPN1-226ENST00000533820 KRTAP2-2Q9BYT5 123 aa5.53□□□□□ -1.52
CAPN1-226ENST00000533820 LCE3DQ9BYE3 92 aa5.51□□□□□ -1.53
CAPN1-226ENST00000533820 MT1AP04731 61 aa5.48□□□□□ -1.53
CAPN1-226ENST00000533820 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
CAPN1-226ENST00000533820 KRTAP5-5Q701N2 237 aaPredicted RBP5.39□□□□□ -1.55
CAPN1-226ENST00000533820 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.39□□□□□ -1.55
CAPN1-226ENST00000533820 SPRR2EP22531 72 aa5.37□□□□□ -1.55
CAPN1-226ENST00000533820 SPRR2BP35325 72 aa5.37□□□□□ -1.55
CAPN1-226ENST00000533820 SPRR2AP35326 72 aa5.37□□□□□ -1.55
CAPN1-226ENST00000533820 LCE1EQ5T753 118 aa5.37□□□□□ -1.55
CAPN1-226ENST00000533820 KRTAP5-9P26371 169 aa5.33□□□□□ -1.56
CAPN1-226ENST00000533820 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
CAPN1-226ENST00000533820 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
CAPN1-226ENST00000533820 LCE1DQ5T752 114 aa5.12□□□□□ -1.59
CAPN1-226ENST00000533820 SPRR2DP22532 72 aa5.11□□□□□ -1.59
CAPN1-226ENST00000533820 NEBP20929 6669 aa4.97□□□□□ -1.61
CAPN1-226ENST00000533820 MT3P25713 68 aa4.94□□□□□ -1.62
CAPN1-226ENST00000533820 MT4P47944 62 aa4.66□□□□□ -1.66
CAPN1-226ENST00000533820 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
CAPN1-226ENST00000533820 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
CAPN1-226ENST00000533820 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
CAPN1-226ENST00000533820 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
CAPN1-226ENST00000533820 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.7
CAPN1-226ENST00000533820 HMCN1Q96RW7 5635 aa4.4□□□□□ -1.7
CAPN1-226ENST00000533820 MUC19Q7Z5P9 8384 aa4.35□□□□□ -1.71
CAPN1-226ENST00000533820 MUC5ACP98088 5654 aa4.3□□□□□ -1.72
CAPN1-226ENST00000533820 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
CAPN1-226ENST00000533820 KRTAP5-2Q701N4 177 aa4.27□□□□□ -1.73
CAPN1-226ENST00000533820 KRTAP4-11Q9BYQ6 195 aa4.27□□□□□ -1.73
CAPN1-226ENST00000533820 LCE1BQ5T7P3 118 aa4.2□□□□□ -1.74
CAPN1-226ENST00000533820 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
CAPN1-226ENST00000533820 KRTAP5-10Q6L8G5 202 aa3.95□□□□□ -1.78
CAPN1-226ENST00000533820 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
CAPN1-226ENST00000533820 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
CAPN1-226ENST00000533820 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
CAPN1-226ENST00000533820 LCE1CQ5T751 118 aa3.69□□□□□ -1.82
CAPN1-226ENST00000533820 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
CAPN1-226ENST00000533820 KRTAP4-4Q9BYR3 166 aa3.56□□□□□ -1.84
CAPN1-226ENST00000533820 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
CAPN1-226ENST00000533820 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
CAPN1-226ENST00000533820 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
CAPN1-226ENST00000533820 GPR98Q8WXG9 6306 aa3.37□□□□□ -1.87
CAPN1-226ENST00000533820 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
CAPN1-226ENST00000533820 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
CAPN1-226ENST00000533820 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
CAPN1-226ENST00000533820 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
CAPN1-226ENST00000533820 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.91
CAPN1-226ENST00000533820 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
CAPN1-226ENST00000533820 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
CAPN1-226ENST00000533820 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 9.4 ms