RNA–Protein interactions for RNA: ENST00000533660.1

MS4A6A-219, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 4

Gene MS4A6A, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-219ENST00000533660 FAT1Q14517 4588 aa1.47□□□□□ -2.17
MS4A6A-219ENST00000533660 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
MS4A6A-219ENST00000533660 BIRC6Q9NR09 4857 aa1.46□□□□□ -2.18
MS4A6A-219ENST00000533660 RYR3Q15413 4870 aa1.45□□□□□ -2.18
MS4A6A-219ENST00000533660 KRTAP12-3P60328 96 aa1.44□□□□□ -2.18
MS4A6A-219ENST00000533660 RYR1P21817 5038 aa1.43□□□□□ -2.18
MS4A6A-219ENST00000533660 M0R2T5 61 aa1.42□□□□□ -2.18
MS4A6A-219ENST00000533660 KIAA1109Q2LD37 5005 aa1.42□□□□□ -2.18
MS4A6A-219ENST00000533660 HYDINQ4G0P3 5121 aa1.41□□□□□ -2.18
MS4A6A-219ENST00000533660 SPRR2GQ9BYE4 73 aa1.41□□□□□ -2.18
MS4A6A-219ENST00000533660 MT1HL1P0DM35 61 aa1.4□□□□□ -2.19
MS4A6A-219ENST00000533660 KMT2CQ8NEZ4 4911 aaKnown RBP1.39□□□□□ -2.19
MS4A6A-219ENST00000533660 HERC1Q15751 4861 aa1.38□□□□□ -2.19
MS4A6A-219ENST00000533660 KRTAP2-3P0C7H8 128 aa1.38□□□□□ -2.19
MS4A6A-219ENST00000533660 KRTAP2-4Q9BYR9 128 aa1.38□□□□□ -2.19
MS4A6A-219ENST00000533660 KRTAP2-1Q9BYU5 128 aa1.38□□□□□ -2.19
MS4A6A-219ENST00000533660 EPPK1P58107 5090 aaKnown RBP1.36□□□□□ -2.19
MS4A6A-219ENST00000533660 MUC2Q02817 5179 aa1.36□□□□□ -2.19
MS4A6A-219ENST00000533660 KRTAP4-1Q9BYQ7 146 aa1.36□□□□□ -2.19
MS4A6A-219ENST00000533660 KRTAP19-2Q3LHN2 52 aa1.34□□□□□ -2.19
MS4A6A-219ENST00000533660 RYR2Q92736 4967 aa1.31□□□□□ -2.2
MS4A6A-219ENST00000533660 HERC2O95714 4834 aa1.31□□□□□ -2.2
MS4A6A-219ENST00000533660 KRTAP19-8Q3LI54 63 aa1.31□□□□□ -2.2
MS4A6A-219ENST00000533660 HMCN1Q96RW7 5635 aa1.3□□□□□ -2.2
MS4A6A-219ENST00000533660 MUC17Q685J3 4493 aa1.3□□□□□ -2.2
MS4A6A-219ENST00000533660 LPAP08519 4548 aa1.3□□□□□ -2.2
MS4A6A-219ENST00000533660 LRP2P98164 4655 aa1.3□□□□□ -2.2
MS4A6A-219ENST00000533660 MT1XP80297 61 aa1.28□□□□□ -2.2
MS4A6A-219ENST00000533660 KRTAP19-5Q3LI72 72 aa1.26□□□□□ -2.21
MS4A6A-219ENST00000533660 KRTAP6-3Q3LI67 103 aa1.25□□□□□ -2.21
MS4A6A-219ENST00000533660 MT1BP07438 61 aa1.22□□□□□ -2.21
MS4A6A-219ENST00000533660 ABCA13Q86UQ4 5058 aa1.21□□□□□ -2.22
MS4A6A-219ENST00000533660 MT2AP02795 61 aa1.2□□□□□ -2.22
MS4A6A-219ENST00000533660 FCGBPQ9Y6R7 5405 aaPredicted RBP1.2□□□□□ -2.22
MS4A6A-219ENST00000533660 MT1FP04733 61 aa1.19□□□□□ -2.22
MS4A6A-219ENST00000533660 MT1EP04732 61 aa1.16□□□□□ -2.22
MS4A6A-219ENST00000533660 FAT4Q6V0I7 4981 aa1.15□□□□□ -2.22
MS4A6A-219ENST00000533660 MT1AP04731 61 aa1.15□□□□□ -2.23
MS4A6A-219ENST00000533660 MT1HP80294 61 aa1.15□□□□□ -2.23
MS4A6A-219ENST00000533660 MT1LQ93083 61 aa1.15□□□□□ -2.23
MS4A6A-219ENST00000533660 PRM1P04553 51 aa1.14□□□□□ -2.23
MS4A6A-219ENST00000533660 HMCN2Q8NDA2 5059 aa1.13□□□□□ -2.23
MS4A6A-219ENST00000533660 KRTAP19-7Q3SYF9 63 aa1.12□□□□□ -2.23
MS4A6A-219ENST00000533660 RNF213Q63HN8 5207 aa1.07□□□□□ -2.24
MS4A6A-219ENST00000533660 SSPOA2VEC9 5147 aa1.07□□□□□ -2.24
MS4A6A-219ENST00000533660 FSIP2Q5CZC0 6907 aa1.07□□□□□ -2.24
MS4A6A-219ENST00000533660 SPRR2FQ96RM1 72 aa1.06□□□□□ -2.24
MS4A6A-219ENST00000533660 MT1GP13640 62 aa1.04□□□□□ -2.24
MS4A6A-219ENST00000533660 SPRR2AP35326 72 aa1.03□□□□□ -2.24
MS4A6A-219ENST00000533660 KRTAP20-1Q3LI63 56 aa1.02□□□□□ -2.25
MS4A6A-219ENST00000533660 KRTAP6-2Q3LI66 62 aa1.02□□□□□ -2.25
MS4A6A-219ENST00000533660 MT1MQ8N339 61 aa1.02□□□□□ -2.25
MS4A6A-219ENST00000533660 GPR98Q8WXG9 6306 aa1.01□□□□□ -2.25
MS4A6A-219ENST00000533660 SPRR2BP35325 72 aa1.01□□□□□ -2.25
MS4A6A-219ENST00000533660 KRTAP19-3Q7Z4W3 81 aa1.01□□□□□ -2.25
MS4A6A-219ENST00000533660 SPRR2EP22531 72 aa0.98□□□□□ -2.25
MS4A6A-219ENST00000533660 SPRR2DP22532 72 aa0.97□□□□□ -2.25
MS4A6A-219ENST00000533660 KRTAP6-1Q3LI64 71 aa0.94□□□□□ -2.26
MS4A6A-219ENST00000533660 NEBP20929 6669 aa0.94□□□□□ -2.26
MS4A6A-219ENST00000533660 SYNE1Q8NF91 8797 aaKnown RBP0.91□□□□□ -2.26
MS4A6A-219ENST00000533660 KMT2DO14686 5537 aa0.9□□□□□ -2.26
MS4A6A-219ENST00000533660 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
MS4A6A-219ENST00000533660 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
MS4A6A-219ENST00000533660 SYNE2Q8WXH0 6885 aaKnown RBP0.89□□□□□ -2.27
MS4A6A-219ENST00000533660 KRTAP19-6Q3LI70 58 aa0.87□□□□□ -2.27
MS4A6A-219ENST00000533660 KRTAP5-10Q6L8G5 202 aa0.87□□□□□ -2.27
MS4A6A-219ENST00000533660 USH2AO75445 5202 aa0.86□□□□□ -2.27
MS4A6A-219ENST00000533660 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
MS4A6A-219ENST00000533660 MUC5BQ9HC84 5762 aaPredicted RBP0.81□□□□□ -2.28
MS4A6A-219ENST00000533660 AHNAKQ09666 5890 aaKnown RBP0.8□□□□□ -2.28
MS4A6A-219ENST00000533660 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
MS4A6A-219ENST00000533660 MDN1Q9NU22 5596 aa0.76□□□□□ -2.29
MS4A6A-219ENST00000533660 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
MS4A6A-219ENST00000533660 DSTQ03001 7570 aaKnown RBP0.73□□□□□ -2.29
MS4A6A-219ENST00000533660 MUC5ACP98088 5654 aa0.72□□□□□ -2.29
MS4A6A-219ENST00000533660 KRTAP20-2Q3LI61 65 aa0.6□□□□□ -2.31
MS4A6A-219ENST00000533660 MT4P47944 62 aa0.59□□□□□ -2.31
MS4A6A-219ENST00000533660 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 139.4 ms