RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
BDNF-216ENST00000532997 KRTAP19-3Q7Z4W3 81 aa3□□□□□ -1.93
BDNF-216ENST00000532997 KMT2DO14686 5537 aa2.99□□□□□ -1.93
BDNF-216ENST00000532997 KRTAP19-6Q3LI70 58 aa2.99□□□□□ -1.93
BDNF-216ENST00000532997 MT1MQ8N339 61 aa2.97□□□□□ -1.93
BDNF-216ENST00000532997 LOC100996750A0A140TA64 210 aa2.94□□□□□ -1.94
BDNF-216ENST00000532997 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
BDNF-216ENST00000532997 KRTAP4-6Q9BYQ5 205 aa2.94□□□□□ -1.94
BDNF-216ENST00000532997 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
BDNF-216ENST00000532997 LCE3BQ5TA77 95 aa2.9□□□□□ -1.94
BDNF-216ENST00000532997 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
BDNF-216ENST00000532997 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
BDNF-216ENST00000532997 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
BDNF-216ENST00000532997 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
BDNF-216ENST00000532997 KRTAP9-2Q9BYQ4 174 aa2.8□□□□□ -1.96
BDNF-216ENST00000532997 SSPOA2VEC9 5147 aa2.79□□□□□ -1.96
BDNF-216ENST00000532997 MT1AP04731 61 aa2.78□□□□□ -1.96
BDNF-216ENST00000532997 LCE5AQ5TCM9 118 aa2.76□□□□□ -1.97
BDNF-216ENST00000532997 KRTAP9-6A0A140TA67 174 aa2.74□□□□□ -1.97
BDNF-216ENST00000532997 SYNE1Q8NF91 8797 aaKnown RBP2.74□□□□□ -1.97
BDNF-216ENST00000532997 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
BDNF-216ENST00000532997 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
BDNF-216ENST00000532997 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
BDNF-216ENST00000532997 KRTAP4-9Q9BYQ8 210 aa2.69□□□□□ -1.98
BDNF-216ENST00000532997 MACF1Q9UPN3 7388 aaKnown RBP2.68□□□□□ -1.98
BDNF-216ENST00000532997 PRM1P04553 51 aa2.68□□□□□ -1.98
BDNF-216ENST00000532997 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
BDNF-216ENST00000532997 SPRR2EP22531 72 aa2.65□□□□□ -1.98
BDNF-216ENST00000532997 SPRR2BP35325 72 aa2.65□□□□□ -1.98
BDNF-216ENST00000532997 SPRR2AP35326 72 aa2.65□□□□□ -1.98
BDNF-216ENST00000532997 LCE1EQ5T753 118 aa2.58□□□□□ -2
BDNF-216ENST00000532997 MT3P25713 68 aa2.57□□□□□ -2
BDNF-216ENST00000532997 LCE1FQ5T754 118 aa2.56□□□□□ -2
BDNF-216ENST00000532997 SPRR2DP22532 72 aa2.55□□□□□ -2
BDNF-216ENST00000532997 KRTAP9-7A8MTY7 169 aa2.54□□□□□ -2
BDNF-216ENST00000532997 KRTAP9-4Q9BYQ2 154 aa2.53□□□□□ -2
BDNF-216ENST00000532997 MDN1Q9NU22 5596 aa2.53□□□□□ -2.01
BDNF-216ENST00000532997 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
BDNF-216ENST00000532997 KRTAP2-2Q9BYT5 123 aa2.51□□□□□ -2.01
BDNF-216ENST00000532997 KRTAP6-2Q3LI66 62 aa2.51□□□□□ -2.01
BDNF-216ENST00000532997 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.47□□□□□ -2.01
BDNF-216ENST00000532997 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
BDNF-216ENST00000532997 KRTAP5-9P26371 169 aa2.43□□□□□ -2.02
BDNF-216ENST00000532997 LCE1DQ5T752 114 aa2.41□□□□□ -2.02
BDNF-216ENST00000532997 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
BDNF-216ENST00000532997 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
BDNF-216ENST00000532997 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
BDNF-216ENST00000532997 LCE4AQ5TA78 99 aa2.36□□□□□ -2.03
BDNF-216ENST00000532997 KRTAP9-9Q9BYP9 154 aa2.35□□□□□ -2.03
BDNF-216ENST00000532997 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
BDNF-216ENST00000532997 MT4P47944 62 aa2.22□□□□□ -2.05
BDNF-216ENST00000532997 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
BDNF-216ENST00000532997 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
BDNF-216ENST00000532997 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
BDNF-216ENST00000532997 NEBP20929 6669 aa2.15□□□□□ -2.07
BDNF-216ENST00000532997 KRTAP4-11Q9BYQ6 195 aa2.13□□□□□ -2.07
BDNF-216ENST00000532997 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
BDNF-216ENST00000532997 KRTAP5-4Q6L8H1 288 aa2.1□□□□□ -2.07
BDNF-216ENST00000532997 KRTAP20-2Q3LI61 65 aa2.07□□□□□ -2.08
BDNF-216ENST00000532997 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
BDNF-216ENST00000532997 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
BDNF-216ENST00000532997 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
BDNF-216ENST00000532997 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
BDNF-216ENST00000532997 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
BDNF-216ENST00000532997 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
BDNF-216ENST00000532997 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
BDNF-216ENST00000532997 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
BDNF-216ENST00000532997 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.65□□□□□ -2.15
BDNF-216ENST00000532997 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
BDNF-216ENST00000532997 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
BDNF-216ENST00000532997 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
BDNF-216ENST00000532997 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
BDNF-216ENST00000532997 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
BDNF-216ENST00000532997 KRTAP5-11Q6L8G4 156 aa1.54□□□□□ -2.16
BDNF-216ENST00000532997 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
BDNF-216ENST00000532997 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
BDNF-216ENST00000532997 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 42.7 ms