RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 MT1MQ8N339 61 aa8.12□□□□□ -1.11
CAPN1-222ENST00000532285 Q1T7F1 81 aa8.11□□□□□ -1.11
CAPN1-222ENST00000532285 PSPHP1O15172 72 aa8.09□□□□□ -1.11
CAPN1-222ENST00000532285 K7ERS5 55 aa8.07□□□□□ -1.12
CAPN1-222ENST00000532285 KRTAP12-3P60328 96 aa8□□□□□ -1.13
CAPN1-222ENST00000532285 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
CAPN1-222ENST00000532285 KRTAP4-9Q9BYQ8 210 aa7.93□□□□□ -1.14
CAPN1-222ENST00000532285 KRTAP4-3Q9BYR4 195 aa7.91□□□□□ -1.14
CAPN1-222ENST00000532285 PCP4P48539 62 aa7.89□□□□□ -1.15
CAPN1-222ENST00000532285 GPR98Q8WXG9 6306 aa7.87□□□□□ -1.15
CAPN1-222ENST00000532285 A6NED7 52 aa7.84□□□□□ -1.15
CAPN1-222ENST00000532285 LCE4AQ5TA78 99 aa7.82□□□□□ -1.16
CAPN1-222ENST00000532285 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
CAPN1-222ENST00000532285 LCE1DQ5T752 114 aa7.77□□□□□ -1.17
CAPN1-222ENST00000532285 KRTAP4-7Q9BYR0 210 aa7.77□□□□□ -1.17
CAPN1-222ENST00000532285 KRTAP23-1A1A580 65 aa7.72□□□□□ -1.17
CAPN1-222ENST00000532285 MT4P47944 62 aa7.7□□□□□ -1.18
CAPN1-222ENST00000532285 KRTAP5-4Q6L8H1 288 aa7.69□□□□□ -1.18
CAPN1-222ENST00000532285 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
CAPN1-222ENST00000532285 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
CAPN1-222ENST00000532285 HMCN1Q96RW7 5635 aa7.6□□□□□ -1.19
CAPN1-222ENST00000532285 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.21
CAPN1-222ENST00000532285 ROMO1P60602 79 aa7.51□□□□□ -1.21
CAPN1-222ENST00000532285 KRTAP4-6Q9BYQ5 205 aa7.49□□□□□ -1.21
CAPN1-222ENST00000532285 KRTAP5-5Q701N2 237 aaPredicted RBP7.44□□□□□ -1.22
CAPN1-222ENST00000532285 LCE3CQ5T5A8 94 aa7.38□□□□□ -1.23
CAPN1-222ENST00000532285 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
CAPN1-222ENST00000532285 AHNAK2Q8IVF2 5795 aa7.26□□□□□ -1.25
CAPN1-222ENST00000532285 KRTAP12-4P60329 112 aa7.25□□□□□ -1.25
CAPN1-222ENST00000532285 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
CAPN1-222ENST00000532285 KRTAP20-2Q3LI61 65 aa7.24□□□□□ -1.25
CAPN1-222ENST00000532285 KRTAP5-10Q6L8G5 202 aa7.16□□□□□ -1.26
CAPN1-222ENST00000532285 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
CAPN1-222ENST00000532285 KRTAP5-3Q6L8H2 238 aa7.03□□□□□ -1.28
CAPN1-222ENST00000532285 MT1AP04731 61 aa6.97□□□□□ -1.29
CAPN1-222ENST00000532285 KRTAP9-6A8MVA2 160 aa6.93□□□□□ -1.3
CAPN1-222ENST00000532285 KRTAP6-1Q3LI64 71 aa6.91□□□□□ -1.3
CAPN1-222ENST00000532285 KRTAP5-7Q6L8G8 165 aa6.88□□□□□ -1.31
CAPN1-222ENST00000532285 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
CAPN1-222ENST00000532285 KRTAP5-2Q701N4 177 aa6.75□□□□□ -1.33
CAPN1-222ENST00000532285 KRTAP9-4Q9BYQ2 154 aa6.74□□□□□ -1.33
CAPN1-222ENST00000532285 KRTAP6-2Q3LI66 62 aa6.59□□□□□ -1.35
CAPN1-222ENST00000532285 KRTAP4-11Q9BYQ6 195 aa6.59□□□□□ -1.35
CAPN1-222ENST00000532285 PMAIP1Q13794 54 aa6.42□□□□□ -1.38
CAPN1-222ENST00000532285 MT3P25713 68 aa6.38□□□□□ -1.39
CAPN1-222ENST00000532285 KRTAP5-8O75690 187 aa6.36□□□□□ -1.39
CAPN1-222ENST00000532285 PRO0628Q9UI54 55 aa6.31□□□□□ -1.4
CAPN1-222ENST00000532285 OBSCNQ5VST9 7968 aa6.26□□□□□ -1.41
CAPN1-222ENST00000532285 PRAC1Q96KF2 57 aa6.13□□□□□ -1.43
CAPN1-222ENST00000532285 KRTAP5-1Q6L8H4 278 aa6.03□□□□□ -1.44
CAPN1-222ENST00000532285 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
CAPN1-222ENST00000532285 AHNAKQ09666 5890 aaKnown RBP6.02□□□□□ -1.45
CAPN1-222ENST00000532285 MUC5ACP98088 5654 aa5.97□□□□□ -1.45
CAPN1-222ENST00000532285 MUC5BQ9HC84 5762 aaPredicted RBP5.93□□□□□ -1.46
CAPN1-222ENST00000532285 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.46
CAPN1-222ENST00000532285 LCE1EQ5T753 118 aa5.85□□□□□ -1.47
CAPN1-222ENST00000532285 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
CAPN1-222ENST00000532285 KRTAP4-2Q9BYR5 136 aa5.48□□□□□ -1.53
CAPN1-222ENST00000532285 LCE1BQ5T7P3 118 aa5.47□□□□□ -1.53
CAPN1-222ENST00000532285 LCE1CQ5T751 118 aa5.42□□□□□ -1.54
CAPN1-222ENST00000532285 LCE3DQ9BYE3 92 aa5.35□□□□□ -1.55
CAPN1-222ENST00000532285 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
CAPN1-222ENST00000532285 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
CAPN1-222ENST00000532285 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.95□□□□□ -1.62
CAPN1-222ENST00000532285 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
CAPN1-222ENST00000532285 KRTAP5-11Q6L8G4 156 aa4.89□□□□□ -1.63
CAPN1-222ENST00000532285 LCE1FQ5T754 118 aa4.76□□□□□ -1.65
CAPN1-222ENST00000532285 KRTAP21-2Q3LI59 83 aa4.55□□□□□ -1.68
CAPN1-222ENST00000532285 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
CAPN1-222ENST00000532285 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
CAPN1-222ENST00000532285 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
CAPN1-222ENST00000532285 A0A0A0MQY5 61 aa3.99□□□□□ -1.77
CAPN1-222ENST00000532285 H3BS24 57 aa3.93□□□□□ -1.78
CAPN1-222ENST00000532285 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
CAPN1-222ENST00000532285 PRM1P04553 51 aa3.83□□□□□ -1.8
CAPN1-222ENST00000532285 INE1O15225 51 aa3.76□□□□□ -1.81
CAPN1-222ENST00000532285 KRTAP21-1Q3LI58 79 aa3.17□□□□□ -1.9
CAPN1-222ENST00000532285 MUC16Q8WXI7 14507 aa2.76□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms