RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
NXF1-211ENST00000531709 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
NXF1-211ENST00000531709 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
NXF1-211ENST00000531709 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
NXF1-211ENST00000531709 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
NXF1-211ENST00000531709 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
NXF1-211ENST00000531709 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
NXF1-211ENST00000531709 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
NXF1-211ENST00000531709 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
NXF1-211ENST00000531709 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
NXF1-211ENST00000531709 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
NXF1-211ENST00000531709 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
NXF1-211ENST00000531709 SSPOA2VEC9 5147 aa3.65□□□□□ -1.83
NXF1-211ENST00000531709 LCE3BQ5TA77 95 aa3.63□□□□□ -1.83
NXF1-211ENST00000531709 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
NXF1-211ENST00000531709 MT1MQ8N339 61 aa3.59□□□□□ -1.83
NXF1-211ENST00000531709 KRTAP19-6Q3LI70 58 aa3.59□□□□□ -1.84
NXF1-211ENST00000531709 SYNE2Q8WXH0 6885 aaKnown RBP3.54□□□□□ -1.84
NXF1-211ENST00000531709 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
NXF1-211ENST00000531709 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
NXF1-211ENST00000531709 SPRR2EP22531 72 aa3.4□□□□□ -1.87
NXF1-211ENST00000531709 SPRR2BP35325 72 aa3.4□□□□□ -1.87
NXF1-211ENST00000531709 SPRR2AP35326 72 aa3.4□□□□□ -1.87
NXF1-211ENST00000531709 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
NXF1-211ENST00000531709 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
NXF1-211ENST00000531709 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.88
NXF1-211ENST00000531709 LCE3EQ5T5B0 92 aa3.32□□□□□ -1.88
NXF1-211ENST00000531709 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
NXF1-211ENST00000531709 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.25□□□□□ -1.89
NXF1-211ENST00000531709 SPRR2DP22532 72 aa3.25□□□□□ -1.89
NXF1-211ENST00000531709 PRM1P04553 51 aa3.24□□□□□ -1.89
NXF1-211ENST00000531709 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
NXF1-211ENST00000531709 MT1AP04731 61 aa3.21□□□□□ -1.89
NXF1-211ENST00000531709 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
NXF1-211ENST00000531709 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
NXF1-211ENST00000531709 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
NXF1-211ENST00000531709 MT3P25713 68 aa3.03□□□□□ -1.92
NXF1-211ENST00000531709 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
NXF1-211ENST00000531709 KRTAP9-4Q9BYQ2 154 aa3.01□□□□□ -1.93
NXF1-211ENST00000531709 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
NXF1-211ENST00000531709 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
NXF1-211ENST00000531709 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
NXF1-211ENST00000531709 KRTAP5-5Q701N2 237 aaPredicted RBP2.95□□□□□ -1.94
NXF1-211ENST00000531709 MT4P47944 62 aa2.95□□□□□ -1.94
NXF1-211ENST00000531709 NEBP20929 6669 aa2.92□□□□□ -1.94
NXF1-211ENST00000531709 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
NXF1-211ENST00000531709 LCE1FQ5T754 118 aa2.91□□□□□ -1.94
NXF1-211ENST00000531709 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
NXF1-211ENST00000531709 LCE1DQ5T752 114 aa2.79□□□□□ -1.96
NXF1-211ENST00000531709 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
NXF1-211ENST00000531709 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
NXF1-211ENST00000531709 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
NXF1-211ENST00000531709 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
NXF1-211ENST00000531709 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
NXF1-211ENST00000531709 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
NXF1-211ENST00000531709 KRTAP5-4Q6L8H1 288 aa2.47□□□□□ -2.01
NXF1-211ENST00000531709 KRTAP4-11Q9BYQ6 195 aa2.47□□□□□ -2.01
NXF1-211ENST00000531709 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
NXF1-211ENST00000531709 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
NXF1-211ENST00000531709 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
NXF1-211ENST00000531709 KRTAP5-3Q6L8H2 238 aa2.23□□□□□ -2.05
NXF1-211ENST00000531709 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
NXF1-211ENST00000531709 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
NXF1-211ENST00000531709 AHNAK2Q8IVF2 5795 aa2.14□□□□□ -2.07
NXF1-211ENST00000531709 KRTAP4-2Q9BYR5 136 aa2.1□□□□□ -2.07
NXF1-211ENST00000531709 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
NXF1-211ENST00000531709 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
NXF1-211ENST00000531709 KRTAP21-2Q3LI59 83 aa1.98□□□□□ -2.09
NXF1-211ENST00000531709 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
NXF1-211ENST00000531709 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
NXF1-211ENST00000531709 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
NXF1-211ENST00000531709 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
NXF1-211ENST00000531709 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
NXF1-211ENST00000531709 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
NXF1-211ENST00000531709 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
NXF1-211ENST00000531709 PHGR1C9JFL3 82 aa1.62□□□□□ -2.15
NXF1-211ENST00000531709 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms