RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 KRTAP2-3P0C7H8 128 aa4.33□□□□□ -1.72
CLINT1-210ENST00000530742 KRTAP2-4Q9BYR9 128 aa4.33□□□□□ -1.72
CLINT1-210ENST00000530742 KRTAP2-1Q9BYU5 128 aa4.33□□□□□ -1.72
CLINT1-210ENST00000530742 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
CLINT1-210ENST00000530742 MT1GP13640 62 aa4.16□□□□□ -1.74
CLINT1-210ENST00000530742 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
CLINT1-210ENST00000530742 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
CLINT1-210ENST00000530742 MT1MQ8N339 61 aa4.13□□□□□ -1.75
CLINT1-210ENST00000530742 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
CLINT1-210ENST00000530742 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.08□□□□□ -1.76
CLINT1-210ENST00000530742 LCE5AQ5TCM9 118 aa4.07□□□□□ -1.76
CLINT1-210ENST00000530742 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
CLINT1-210ENST00000530742 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
CLINT1-210ENST00000530742 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
CLINT1-210ENST00000530742 LOC100996750A0A140TA64 210 aa3.96□□□□□ -1.78
CLINT1-210ENST00000530742 KRTAP5-9P26371 169 aa3.91□□□□□ -1.78
CLINT1-210ENST00000530742 SPRR2FQ96RM1 72 aa3.88□□□□□ -1.79
CLINT1-210ENST00000530742 MUC12Q9UKN1 5478 aa3.86□□□□□ -1.79
CLINT1-210ENST00000530742 KRTAP4-6Q9BYQ5 205 aa3.8□□□□□ -1.8
CLINT1-210ENST00000530742 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CLINT1-210ENST00000530742 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
CLINT1-210ENST00000530742 MT1AP04731 61 aa3.77□□□□□ -1.81
CLINT1-210ENST00000530742 KRTAP6-1Q3LI64 71 aa3.68□□□□□ -1.82
CLINT1-210ENST00000530742 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
CLINT1-210ENST00000530742 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
CLINT1-210ENST00000530742 NEBP20929 6669 aa3.64□□□□□ -1.83
CLINT1-210ENST00000530742 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
CLINT1-210ENST00000530742 SPRR2EP22531 72 aa3.59□□□□□ -1.83
CLINT1-210ENST00000530742 SPRR2BP35325 72 aa3.59□□□□□ -1.83
CLINT1-210ENST00000530742 SPRR2AP35326 72 aa3.59□□□□□ -1.83
CLINT1-210ENST00000530742 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
CLINT1-210ENST00000530742 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
CLINT1-210ENST00000530742 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
CLINT1-210ENST00000530742 DSTQ03001 7570 aaKnown RBP3.49□□□□□ -1.85
CLINT1-210ENST00000530742 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
CLINT1-210ENST00000530742 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
CLINT1-210ENST00000530742 SPRR2DP22532 72 aa3.45□□□□□ -1.86
CLINT1-210ENST00000530742 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
CLINT1-210ENST00000530742 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
CLINT1-210ENST00000530742 MT3P25713 68 aa3.33□□□□□ -1.88
CLINT1-210ENST00000530742 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
CLINT1-210ENST00000530742 KRTAP6-2Q3LI66 62 aa3.28□□□□□ -1.88
CLINT1-210ENST00000530742 GPR98Q8WXG9 6306 aa3.28□□□□□ -1.89
CLINT1-210ENST00000530742 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
CLINT1-210ENST00000530742 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
CLINT1-210ENST00000530742 LCE4AQ5TA78 99 aa3.17□□□□□ -1.9
CLINT1-210ENST00000530742 PRM1P04553 51 aa3.17□□□□□ -1.9
CLINT1-210ENST00000530742 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
CLINT1-210ENST00000530742 KRTAP20-2Q3LI61 65 aa3.08□□□□□ -1.92
CLINT1-210ENST00000530742 MT4P47944 62 aa3.04□□□□□ -1.92
CLINT1-210ENST00000530742 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
CLINT1-210ENST00000530742 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
CLINT1-210ENST00000530742 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
CLINT1-210ENST00000530742 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
CLINT1-210ENST00000530742 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
CLINT1-210ENST00000530742 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
CLINT1-210ENST00000530742 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
CLINT1-210ENST00000530742 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
CLINT1-210ENST00000530742 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
CLINT1-210ENST00000530742 KRTAP4-11Q9BYQ6 195 aa2.74□□□□□ -1.97
CLINT1-210ENST00000530742 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
CLINT1-210ENST00000530742 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
CLINT1-210ENST00000530742 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
CLINT1-210ENST00000530742 LCE1BQ5T7P3 118 aa2.69□□□□□ -1.98
CLINT1-210ENST00000530742 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.62□□□□□ -1.99
CLINT1-210ENST00000530742 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
CLINT1-210ENST00000530742 KRTAP5-8O75690 187 aa2.57□□□□□ -2
CLINT1-210ENST00000530742 AHNAKQ09666 5890 aaKnown RBP2.46□□□□□ -2.01
CLINT1-210ENST00000530742 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
CLINT1-210ENST00000530742 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
CLINT1-210ENST00000530742 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
CLINT1-210ENST00000530742 KRTAP21-1Q3LI58 79 aa2.14□□□□□ -2.07
CLINT1-210ENST00000530742 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
CLINT1-210ENST00000530742 PHGR1C9JFL3 82 aa1.99□□□□□ -2.09
CLINT1-210ENST00000530742 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
CLINT1-210ENST00000530742 MUC19Q7Z5P9 8384 aa1.88□□□□□ -2.11
CLINT1-210ENST00000530742 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms