RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 KRTAP9-7A8MTY7 169 aa3.93□□□□□ -1.78
TRIM3-210ENST00000530724 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.79
TRIM3-210ENST00000530724 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.79
TRIM3-210ENST00000530724 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.82□□□□□ -1.8
TRIM3-210ENST00000530724 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
TRIM3-210ENST00000530724 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
TRIM3-210ENST00000530724 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
TRIM3-210ENST00000530724 USH2AO75445 5202 aa3.71□□□□□ -1.82
TRIM3-210ENST00000530724 SYNE2Q8WXH0 6885 aaKnown RBP3.69□□□□□ -1.82
TRIM3-210ENST00000530724 KRTAP19-6Q3LI70 58 aa3.68□□□□□ -1.82
TRIM3-210ENST00000530724 MT1GP13640 62 aa3.67□□□□□ -1.82
TRIM3-210ENST00000530724 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
TRIM3-210ENST00000530724 MT1AP04731 61 aa3.65□□□□□ -1.83
TRIM3-210ENST00000530724 MT1MQ8N339 61 aa3.64□□□□□ -1.83
TRIM3-210ENST00000530724 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
TRIM3-210ENST00000530724 KRTAP9-4Q9BYQ2 154 aa3.64□□□□□ -1.83
TRIM3-210ENST00000530724 KMT2DO14686 5537 aa3.64□□□□□ -1.83
TRIM3-210ENST00000530724 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
TRIM3-210ENST00000530724 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
TRIM3-210ENST00000530724 KRTAP19-3Q7Z4W3 81 aa3.62□□□□□ -1.83
TRIM3-210ENST00000530724 FCGBPQ9Y6R7 5405 aaPredicted RBP3.57□□□□□ -1.84
TRIM3-210ENST00000530724 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
TRIM3-210ENST00000530724 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
TRIM3-210ENST00000530724 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
TRIM3-210ENST00000530724 NEBP20929 6669 aa3.48□□□□□ -1.85
TRIM3-210ENST00000530724 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
TRIM3-210ENST00000530724 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
TRIM3-210ENST00000530724 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
TRIM3-210ENST00000530724 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
TRIM3-210ENST00000530724 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
TRIM3-210ENST00000530724 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
TRIM3-210ENST00000530724 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
TRIM3-210ENST00000530724 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
TRIM3-210ENST00000530724 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
TRIM3-210ENST00000530724 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
TRIM3-210ENST00000530724 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
TRIM3-210ENST00000530724 PRM1P04553 51 aa3.26□□□□□ -1.89
TRIM3-210ENST00000530724 KRTAP4-11Q9BYQ6 195 aa3.26□□□□□ -1.89
TRIM3-210ENST00000530724 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
TRIM3-210ENST00000530724 MDN1Q9NU22 5596 aa3.18□□□□□ -1.9
TRIM3-210ENST00000530724 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
TRIM3-210ENST00000530724 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
TRIM3-210ENST00000530724 SPRR2AP35326 72 aa3.08□□□□□ -1.92
TRIM3-210ENST00000530724 LCE1AQ5T7P2 110 aa3.06□□□□□ -1.92
TRIM3-210ENST00000530724 SYNE1Q8NF91 8797 aaKnown RBP3.05□□□□□ -1.92
TRIM3-210ENST00000530724 MT3P25713 68 aa3.02□□□□□ -1.93
TRIM3-210ENST00000530724 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
TRIM3-210ENST00000530724 SPRR2EP22531 72 aa2.96□□□□□ -1.94
TRIM3-210ENST00000530724 SPRR2BP35325 72 aa2.91□□□□□ -1.94
TRIM3-210ENST00000530724 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
TRIM3-210ENST00000530724 DSTQ03001 7570 aaKnown RBP2.87□□□□□ -1.95
TRIM3-210ENST00000530724 SPRR2DP22532 72 aa2.81□□□□□ -1.96
TRIM3-210ENST00000530724 KRTAP5-4Q6L8H1 288 aa2.79□□□□□ -1.96
TRIM3-210ENST00000530724 AHNAK2Q8IVF2 5795 aa2.73□□□□□ -1.97
TRIM3-210ENST00000530724 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
TRIM3-210ENST00000530724 KRTAP5-2Q701N4 177 aa2.68□□□□□ -1.98
TRIM3-210ENST00000530724 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
TRIM3-210ENST00000530724 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
TRIM3-210ENST00000530724 MT4P47944 62 aa2.53□□□□□ -2
TRIM3-210ENST00000530724 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
TRIM3-210ENST00000530724 KRTAP5-1Q6L8H4 278 aa2.51□□□□□ -2.01
TRIM3-210ENST00000530724 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
TRIM3-210ENST00000530724 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
TRIM3-210ENST00000530724 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
TRIM3-210ENST00000530724 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
TRIM3-210ENST00000530724 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
TRIM3-210ENST00000530724 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
TRIM3-210ENST00000530724 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
TRIM3-210ENST00000530724 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
TRIM3-210ENST00000530724 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
TRIM3-210ENST00000530724 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
TRIM3-210ENST00000530724 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
TRIM3-210ENST00000530724 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
TRIM3-210ENST00000530724 LCE1FQ5T754 118 aa1.96□□□□□ -2.1
TRIM3-210ENST00000530724 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
TRIM3-210ENST00000530724 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
TRIM3-210ENST00000530724 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
TRIM3-210ENST00000530724 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 59.8 ms