RNA–Protein interactions for RNA: ENST00000530642.1

FOXRED1-210, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 3,045 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-210ENST00000530642 KRTAP10-12P60413 245 aa3.29□□□□□ -1.88
FOXRED1-210ENST00000530642 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
FOXRED1-210ENST00000530642 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
FOXRED1-210ENST00000530642 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
FOXRED1-210ENST00000530642 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
FOXRED1-210ENST00000530642 KRTAP8-1Q8IUC2 63 aa3.25□□□□□ -1.89
FOXRED1-210ENST00000530642 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
FOXRED1-210ENST00000530642 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
FOXRED1-210ENST00000530642 KRTAP9-2Q9BYQ4 174 aa3.23□□□□□ -1.89
FOXRED1-210ENST00000530642 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
FOXRED1-210ENST00000530642 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
FOXRED1-210ENST00000530642 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
FOXRED1-210ENST00000530642 MACF1Q9UPN3 7388 aaKnown RBP3.19□□□□□ -1.9
FOXRED1-210ENST00000530642 LCE1DQ5T752 114 aa3.14□□□□□ -1.91
FOXRED1-210ENST00000530642 KRTAP19-6Q3LI70 58 aa3.13□□□□□ -1.91
FOXRED1-210ENST00000530642 KRTAP4-7Q9BYR0 210 aa3.13□□□□□ -1.91
FOXRED1-210ENST00000530642 KRTAP19-5Q3LI72 72 aa3.12□□□□□ -1.91
FOXRED1-210ENST00000530642 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
FOXRED1-210ENST00000530642 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
FOXRED1-210ENST00000530642 MDN1Q9NU22 5596 aa3.08□□□□□ -1.92
FOXRED1-210ENST00000530642 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
FOXRED1-210ENST00000530642 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
FOXRED1-210ENST00000530642 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
FOXRED1-210ENST00000530642 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
FOXRED1-210ENST00000530642 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
FOXRED1-210ENST00000530642 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
FOXRED1-210ENST00000530642 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
FOXRED1-210ENST00000530642 KRTAP19-7Q3SYF9 63 aa3.02□□□□□ -1.93
FOXRED1-210ENST00000530642 LOC100996750A0A140TA64 210 aa3.01□□□□□ -1.93
FOXRED1-210ENST00000530642 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
FOXRED1-210ENST00000530642 MT1EP04732 61 aa2.95□□□□□ -1.94
FOXRED1-210ENST00000530642 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
FOXRED1-210ENST00000530642 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
FOXRED1-210ENST00000530642 MT1LQ93083 61 aa2.91□□□□□ -1.94
FOXRED1-210ENST00000530642 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
FOXRED1-210ENST00000530642 MT1GP13640 62 aa2.81□□□□□ -1.96
FOXRED1-210ENST00000530642 KRTAP19-3Q7Z4W3 81 aa2.81□□□□□ -1.96
FOXRED1-210ENST00000530642 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
FOXRED1-210ENST00000530642 MT1MQ8N339 61 aa2.76□□□□□ -1.97
FOXRED1-210ENST00000530642 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
FOXRED1-210ENST00000530642 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
FOXRED1-210ENST00000530642 SPRR2EP22531 72 aa2.67□□□□□ -1.98
FOXRED1-210ENST00000530642 SPRR2BP35325 72 aa2.67□□□□□ -1.98
FOXRED1-210ENST00000530642 SPRR2AP35326 72 aa2.67□□□□□ -1.98
FOXRED1-210ENST00000530642 GPR98Q8WXG9 6306 aa2.62□□□□□ -1.99
FOXRED1-210ENST00000530642 PRM1P04553 51 aa2.59□□□□□ -1.99
FOXRED1-210ENST00000530642 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
FOXRED1-210ENST00000530642 SPRR2DP22532 72 aa2.54□□□□□ -2
FOXRED1-210ENST00000530642 NEBP20929 6669 aa2.54□□□□□ -2
FOXRED1-210ENST00000530642 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
FOXRED1-210ENST00000530642 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
FOXRED1-210ENST00000530642 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
FOXRED1-210ENST00000530642 MT1AP04731 61 aa2.46□□□□□ -2.02
FOXRED1-210ENST00000530642 MT4P47944 62 aa2.38□□□□□ -2.03
FOXRED1-210ENST00000530642 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
FOXRED1-210ENST00000530642 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
FOXRED1-210ENST00000530642 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
FOXRED1-210ENST00000530642 MUC19Q7Z5P9 8384 aa2.27□□□□□ -2.05
FOXRED1-210ENST00000530642 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
FOXRED1-210ENST00000530642 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.06
FOXRED1-210ENST00000530642 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
FOXRED1-210ENST00000530642 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
FOXRED1-210ENST00000530642 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
FOXRED1-210ENST00000530642 KRTAP5-2Q701N4 177 aa2.12□□□□□ -2.07
FOXRED1-210ENST00000530642 AHNAKQ09666 5890 aaKnown RBP2.08□□□□□ -2.08
FOXRED1-210ENST00000530642 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
FOXRED1-210ENST00000530642 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
FOXRED1-210ENST00000530642 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
FOXRED1-210ENST00000530642 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
FOXRED1-210ENST00000530642 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
FOXRED1-210ENST00000530642 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
FOXRED1-210ENST00000530642 KRTAP5-8O75690 187 aa1.77□□□□□ -2.13
FOXRED1-210ENST00000530642 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
FOXRED1-210ENST00000530642 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
FOXRED1-210ENST00000530642 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
FOXRED1-210ENST00000530642 KRTAP21-2Q3LI59 83 aa1.61□□□□□ -2.15
FOXRED1-210ENST00000530642 PHGR1C9JFL3 82 aa1.34□□□□□ -2.2
FOXRED1-210ENST00000530642 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 8.8 ms