RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
CASP4-208ENST00000530309 MUC17Q685J3 4493 aa1.14□□□□□ -2.23
CASP4-208ENST00000530309 HYDINQ4G0P3 5121 aa1.12□□□□□ -2.23
CASP4-208ENST00000530309 LPAP08519 4548 aa1.12□□□□□ -2.23
CASP4-208ENST00000530309 UBE2DNLQ8IWF7 75 aa1.11□□□□□ -2.23
CASP4-208ENST00000530309 RYR2Q92736 4967 aa1.11□□□□□ -2.23
CASP4-208ENST00000530309 KMT2CQ8NEZ4 4911 aaKnown RBP1.1□□□□□ -2.23
CASP4-208ENST00000530309 Q5VSD8 79 aa1.09□□□□□ -2.23
CASP4-208ENST00000530309 LRP2P98164 4655 aa1.09□□□□□ -2.24
CASP4-208ENST00000530309 C9orf92A6NGG3 77 aa1.08□□□□□ -2.24
CASP4-208ENST00000530309 KRTAP19-2Q3LHN2 52 aa1.08□□□□□ -2.24
CASP4-208ENST00000530309 RYR1P21817 5038 aa1.08□□□□□ -2.24
CASP4-208ENST00000530309 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
CASP4-208ENST00000530309 HERC2O95714 4834 aa1.04□□□□□ -2.24
CASP4-208ENST00000530309 BIRC6Q9NR09 4857 aa1.03□□□□□ -2.24
CASP4-208ENST00000530309 RYR3Q15413 4870 aa1.03□□□□□ -2.24
CASP4-208ENST00000530309 KRTAP8-1Q8IUC2 63 aa1.03□□□□□ -2.24
CASP4-208ENST00000530309 TNP1P09430 55 aa1□□□□□ -2.25
CASP4-208ENST00000530309 KRTAP2-3P0C7H8 128 aa0.99□□□□□ -2.25
CASP4-208ENST00000530309 MT1HL1P0DM35 61 aa0.99□□□□□ -2.25
CASP4-208ENST00000530309 KRTAP19-3Q7Z4W3 81 aa0.99□□□□□ -2.25
CASP4-208ENST00000530309 KRTAP2-4Q9BYR9 128 aa0.99□□□□□ -2.25
CASP4-208ENST00000530309 KRTAP2-1Q9BYU5 128 aa0.99□□□□□ -2.25
CASP4-208ENST00000530309 PCLOQ9Y6V0 5065 aa0.98□□□□□ -2.25
CASP4-208ENST00000530309 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
CASP4-208ENST00000530309 EPPK1P58107 5090 aaKnown RBP0.97□□□□□ -2.25
CASP4-208ENST00000530309 KIAA1109Q2LD37 5005 aa0.96□□□□□ -2.26
CASP4-208ENST00000530309 ABCA13Q86UQ4 5058 aa0.96□□□□□ -2.26
CASP4-208ENST00000530309 AHNAK2Q8IVF2 5795 aa0.96□□□□□ -2.26
CASP4-208ENST00000530309 UBR4Q5T4S7 5183 aa0.95□□□□□ -2.26
CASP4-208ENST00000530309 HMCN2Q8NDA2 5059 aa0.95□□□□□ -2.26
CASP4-208ENST00000530309 SMR3BP02814 79 aaPredicted RBP0.94□□□□□ -2.26
CASP4-208ENST00000530309 KRTAP19-8Q3LI54 63 aa0.93□□□□□ -2.26
CASP4-208ENST00000530309 KRTAP19-5Q3LI72 72 aa0.92□□□□□ -2.26
CASP4-208ENST00000530309 MUC2Q02817 5179 aa0.9□□□□□ -2.26
CASP4-208ENST00000530309 MT1XP80297 61 aa0.9□□□□□ -2.27
CASP4-208ENST00000530309 RNF213Q63HN8 5207 aa0.89□□□□□ -2.27
CASP4-208ENST00000530309 FAT4Q6V0I7 4981 aa0.88□□□□□ -2.27
CASP4-208ENST00000530309 MT1BP07438 61 aa0.88□□□□□ -2.27
CASP4-208ENST00000530309 MT2AP02795 61 aa0.83□□□□□ -2.28
CASP4-208ENST00000530309 MT1FP04733 61 aa0.83□□□□□ -2.28
CASP4-208ENST00000530309 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
CASP4-208ENST00000530309 MT1EP04732 61 aa0.8□□□□□ -2.28
CASP4-208ENST00000530309 SYNE1Q8NF91 8797 aaKnown RBP0.8□□□□□ -2.28
CASP4-208ENST00000530309 USH2AO75445 5202 aa0.79□□□□□ -2.28
CASP4-208ENST00000530309 SSPOA2VEC9 5147 aa0.78□□□□□ -2.28
CASP4-208ENST00000530309 MT1AP04731 61 aa0.78□□□□□ -2.28
CASP4-208ENST00000530309 MT1HP80294 61 aa0.78□□□□□ -2.28
CASP4-208ENST00000530309 MT1LQ93083 61 aa0.78□□□□□ -2.28
CASP4-208ENST00000530309 KMT2DO14686 5537 aa0.78□□□□□ -2.28
CASP4-208ENST00000530309 M0R2T5 61 aa0.77□□□□□ -2.29
CASP4-208ENST00000530309 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
CASP4-208ENST00000530309 MUC12Q9UKN1 5478 aa0.73□□□□□ -2.29
CASP4-208ENST00000530309 PRM1P04553 51 aa0.71□□□□□ -2.3
CASP4-208ENST00000530309 MT1MQ8N339 61 aa0.69□□□□□ -2.3
CASP4-208ENST00000530309 MDN1Q9NU22 5596 aa0.68□□□□□ -2.3
CASP4-208ENST00000530309 KRTAP6-2Q3LI66 62 aa0.68□□□□□ -2.3
CASP4-208ENST00000530309 MT1GP13640 62 aa0.67□□□□□ -2.3
CASP4-208ENST00000530309 SPRR2FQ96RM1 72 aa0.67□□□□□ -2.3
CASP4-208ENST00000530309 KRTAP6-1Q3LI64 71 aa0.65□□□□□ -2.31
CASP4-208ENST00000530309 SPRR2AP35326 72 aa0.63□□□□□ -2.31
CASP4-208ENST00000530309 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
CASP4-208ENST00000530309 SPRR2BP35325 72 aa0.61□□□□□ -2.31
CASP4-208ENST00000530309 KRTAP19-6Q3LI70 58 aa0.61□□□□□ -2.31
CASP4-208ENST00000530309 SPRR2EP22531 72 aa0.6□□□□□ -2.31
CASP4-208ENST00000530309 FSIP2Q5CZC0 6907 aa0.6□□□□□ -2.31
CASP4-208ENST00000530309 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
CASP4-208ENST00000530309 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.31
CASP4-208ENST00000530309 SPRR2DP22532 72 aa0.58□□□□□ -2.32
CASP4-208ENST00000530309 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
CASP4-208ENST00000530309 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
CASP4-208ENST00000530309 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
CASP4-208ENST00000530309 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
CASP4-208ENST00000530309 NEBP20929 6669 aa0.47□□□□□ -2.33
CASP4-208ENST00000530309 KRTAP20-2Q3LI61 65 aa0.41□□□□□ -2.34
CASP4-208ENST00000530309 KRTAP20-1Q3LI63 56 aa0.34□□□□□ -2.36
CASP4-208ENST00000530309 GPR98Q8WXG9 6306 aa0.32□□□□□ -2.36
CASP4-208ENST00000530309 MT4P47944 62 aa0.27□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 41.2 ms