RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 MT1LQ93083 61 aa4.52□□□□□ -1.69
PACS1-210ENST00000529795 Q1T7F1 81 aa4.5□□□□□ -1.69
PACS1-210ENST00000529795 KRTAP25-1Q3LHN0 102 aa4.49□□□□□ -1.69
PACS1-210ENST00000529795 MT1MQ8N339 61 aa4.49□□□□□ -1.69
PACS1-210ENST00000529795 PSPHP1O15172 72 aa4.46□□□□□ -1.7
PACS1-210ENST00000529795 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
PACS1-210ENST00000529795 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
PACS1-210ENST00000529795 A6NED7 52 aa4.37□□□□□ -1.71
PACS1-210ENST00000529795 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
PACS1-210ENST00000529795 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
PACS1-210ENST00000529795 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
PACS1-210ENST00000529795 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
PACS1-210ENST00000529795 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
PACS1-210ENST00000529795 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
PACS1-210ENST00000529795 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
PACS1-210ENST00000529795 MT4P47944 62 aa4.26□□□□□ -1.73
PACS1-210ENST00000529795 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
PACS1-210ENST00000529795 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
PACS1-210ENST00000529795 PCP4P48539 62 aa4.22□□□□□ -1.73
PACS1-210ENST00000529795 HMCN1Q96RW7 5635 aa4.21□□□□□ -1.73
PACS1-210ENST00000529795 ROMO1P60602 79 aa4.19□□□□□ -1.74
PACS1-210ENST00000529795 KRTAP15-1Q3LI76 137 aa4.19□□□□□ -1.74
PACS1-210ENST00000529795 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
PACS1-210ENST00000529795 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
PACS1-210ENST00000529795 KRTAP12-4P60329 112 aa4.1□□□□□ -1.75
PACS1-210ENST00000529795 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
PACS1-210ENST00000529795 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
PACS1-210ENST00000529795 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
PACS1-210ENST00000529795 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
PACS1-210ENST00000529795 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
PACS1-210ENST00000529795 LOC100996750A0A140TA64 210 aa4□□□□□ -1.77
PACS1-210ENST00000529795 KRTAP5-10Q6L8G5 202 aa3.97□□□□□ -1.77
PACS1-210ENST00000529795 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
PACS1-210ENST00000529795 MT1AP04731 61 aa3.87□□□□□ -1.79
PACS1-210ENST00000529795 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
PACS1-210ENST00000529795 KRTAP5-7Q6L8G8 165 aa3.85□□□□□ -1.79
PACS1-210ENST00000529795 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
PACS1-210ENST00000529795 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
PACS1-210ENST00000529795 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
PACS1-210ENST00000529795 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
PACS1-210ENST00000529795 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
PACS1-210ENST00000529795 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
PACS1-210ENST00000529795 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
PACS1-210ENST00000529795 MT3P25713 68 aa3.59□□□□□ -1.83
PACS1-210ENST00000529795 PMAIP1Q13794 54 aa3.58□□□□□ -1.84
PACS1-210ENST00000529795 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
PACS1-210ENST00000529795 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
PACS1-210ENST00000529795 KRTAP9-9Q9BYP9 154 aa3.41□□□□□ -1.86
PACS1-210ENST00000529795 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
PACS1-210ENST00000529795 MUC5BQ9HC84 5762 aaPredicted RBP3.33□□□□□ -1.88
PACS1-210ENST00000529795 PRAC1Q96KF2 57 aa3.32□□□□□ -1.88
PACS1-210ENST00000529795 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
PACS1-210ENST00000529795 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
PACS1-210ENST00000529795 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
PACS1-210ENST00000529795 LCE1EQ5T753 118 aa3.29□□□□□ -1.88
PACS1-210ENST00000529795 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
PACS1-210ENST00000529795 SVIPQ8NHG7 77 aa3.06□□□□□ -1.92
PACS1-210ENST00000529795 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
PACS1-210ENST00000529795 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
PACS1-210ENST00000529795 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
PACS1-210ENST00000529795 LUZP6Q538Z0 58 aa3□□□□□ -1.93
PACS1-210ENST00000529795 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
PACS1-210ENST00000529795 H3BS24 57 aa2.93□□□□□ -1.94
PACS1-210ENST00000529795 LCE3EQ5T5B0 92 aa2.83□□□□□ -1.96
PACS1-210ENST00000529795 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.76□□□□□ -1.97
PACS1-210ENST00000529795 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
PACS1-210ENST00000529795 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
PACS1-210ENST00000529795 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
PACS1-210ENST00000529795 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
PACS1-210ENST00000529795 A0A0A0MQY5 61 aa2.41□□□□□ -2.02
PACS1-210ENST00000529795 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
PACS1-210ENST00000529795 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
PACS1-210ENST00000529795 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
PACS1-210ENST00000529795 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
PACS1-210ENST00000529795 PRM1P04553 51 aa2.09□□□□□ -2.07
PACS1-210ENST00000529795 INE1O15225 51 aa1.98□□□□□ -2.09
PACS1-210ENST00000529795 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
PACS1-210ENST00000529795 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 396 ms