RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
CMTM1-213ENST00000529506 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
CMTM1-213ENST00000529506 KRTAP5-4Q6L8H1 288 aa6.08□□□□□ -1.44
CMTM1-213ENST00000529506 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
CMTM1-213ENST00000529506 UQCR11O14957 56 aa6.07□□□□□ -1.44
CMTM1-213ENST00000529506 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
CMTM1-213ENST00000529506 HMCN1Q96RW7 5635 aa6.02□□□□□ -1.44
CMTM1-213ENST00000529506 TMEM258P61165 79 aa5.96□□□□□ -1.46
CMTM1-213ENST00000529506 KRTAP4-6Q9BYQ5 205 aa5.95□□□□□ -1.46
CMTM1-213ENST00000529506 KRTAP25-1Q3LHN0 102 aa5.92□□□□□ -1.46
CMTM1-213ENST00000529506 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
CMTM1-213ENST00000529506 K7ERS5 55 aa5.9□□□□□ -1.46
CMTM1-213ENST00000529506 MIR22HGQ0VDD5 57 aa5.89□□□□□ -1.47
CMTM1-213ENST00000529506 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
CMTM1-213ENST00000529506 KRTAP5-10Q6L8G5 202 aa5.84□□□□□ -1.47
CMTM1-213ENST00000529506 AHNAK2Q8IVF2 5795 aa5.81□□□□□ -1.48
CMTM1-213ENST00000529506 V9GYY9 64 aa5.77□□□□□ -1.49
CMTM1-213ENST00000529506 SPRR5A0A1B0GTR4 108 aa5.76□□□□□ -1.49
CMTM1-213ENST00000529506 KRTAP12-4P60329 112 aa5.76□□□□□ -1.49
CMTM1-213ENST00000529506 KRTAP5-5Q701N2 237 aaPredicted RBP5.76□□□□□ -1.49
CMTM1-213ENST00000529506 KRTAP20-2Q3LI61 65 aa5.74□□□□□ -1.49
CMTM1-213ENST00000529506 KRTAP23-1A1A580 65 aa5.73□□□□□ -1.49
CMTM1-213ENST00000529506 KRTAP5-3Q6L8H2 238 aa5.71□□□□□ -1.5
CMTM1-213ENST00000529506 KRTAP5-7Q6L8G8 165 aa5.67□□□□□ -1.5
CMTM1-213ENST00000529506 PSPHP1O15172 72 aa5.66□□□□□ -1.5
CMTM1-213ENST00000529506 Q1T7F1 81 aa5.64□□□□□ -1.51
CMTM1-213ENST00000529506 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
CMTM1-213ENST00000529506 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
CMTM1-213ENST00000529506 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
CMTM1-213ENST00000529506 SYNE1Q8NF91 8797 aaKnown RBP5.57□□□□□ -1.52
CMTM1-213ENST00000529506 A6NED7 52 aa5.5□□□□□ -1.53
CMTM1-213ENST00000529506 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
CMTM1-213ENST00000529506 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
CMTM1-213ENST00000529506 H3BS24 57 aa5.41□□□□□ -1.54
CMTM1-213ENST00000529506 ROMO1P60602 79 aa5.38□□□□□ -1.55
CMTM1-213ENST00000529506 MT1AP04731 61 aa5.37□□□□□ -1.55
CMTM1-213ENST00000529506 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
CMTM1-213ENST00000529506 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
CMTM1-213ENST00000529506 KRTAP4-11Q9BYQ6 195 aa5.29□□□□□ -1.56
CMTM1-213ENST00000529506 KRTAP9-4Q9BYQ2 154 aa5.22□□□□□ -1.57
CMTM1-213ENST00000529506 PCP4P48539 62 aa5.16□□□□□ -1.58
CMTM1-213ENST00000529506 KRTAP9-6A8MVA2 160 aa5.15□□□□□ -1.59
CMTM1-213ENST00000529506 KRTAP6-2Q3LI66 62 aa5.11□□□□□ -1.59
CMTM1-213ENST00000529506 KRTAP5-8O75690 187 aa5.09□□□□□ -1.59
CMTM1-213ENST00000529506 OBSCNQ5VST9 7968 aa4.99□□□□□ -1.61
CMTM1-213ENST00000529506 MT3P25713 68 aa4.97□□□□□ -1.61
CMTM1-213ENST00000529506 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
CMTM1-213ENST00000529506 A0A0A0MQY5 61 aa4.88□□□□□ -1.63
CMTM1-213ENST00000529506 MUC5ACP98088 5654 aa4.83□□□□□ -1.64
CMTM1-213ENST00000529506 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
CMTM1-213ENST00000529506 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
CMTM1-213ENST00000529506 KRTAP5-1Q6L8H4 278 aa4.76□□□□□ -1.65
CMTM1-213ENST00000529506 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
CMTM1-213ENST00000529506 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
CMTM1-213ENST00000529506 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
CMTM1-213ENST00000529506 PMAIP1Q13794 54 aa4.28□□□□□ -1.72
CMTM1-213ENST00000529506 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
CMTM1-213ENST00000529506 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
CMTM1-213ENST00000529506 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
CMTM1-213ENST00000529506 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
CMTM1-213ENST00000529506 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
CMTM1-213ENST00000529506 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
CMTM1-213ENST00000529506 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
CMTM1-213ENST00000529506 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.84□□□□□ -1.79
CMTM1-213ENST00000529506 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
CMTM1-213ENST00000529506 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
CMTM1-213ENST00000529506 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
CMTM1-213ENST00000529506 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
CMTM1-213ENST00000529506 NDUFAF8A1L188 74 aa3.5□□□□□ -1.85
CMTM1-213ENST00000529506 KRTAP21-2Q3LI59 83 aa3.5□□□□□ -1.85
CMTM1-213ENST00000529506 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
CMTM1-213ENST00000529506 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
CMTM1-213ENST00000529506 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
CMTM1-213ENST00000529506 PRM1P04553 51 aa2.7□□□□□ -1.98
CMTM1-213ENST00000529506 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
CMTM1-213ENST00000529506 INE1O15225 51 aa2.37□□□□□ -2.03
CMTM1-213ENST00000529506 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 94.2 ms