RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
SSRP1-204ENST00000529002 A0A1B0GV90 55 aa6.05□□□□□ -1.44
SSRP1-204ENST00000529002 AHNAKQ09666 5890 aaKnown RBP6.03□□□□□ -1.44
SSRP1-204ENST00000529002 MUC5ACP98088 5654 aa6.03□□□□□ -1.44
SSRP1-204ENST00000529002 KRTAP5-8O75690 187 aa6.01□□□□□ -1.45
SSRP1-204ENST00000529002 TNP1P09430 55 aa5.99□□□□□ -1.45
SSRP1-204ENST00000529002 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
SSRP1-204ENST00000529002 MUC5BQ9HC84 5762 aaPredicted RBP5.95□□□□□ -1.46
SSRP1-204ENST00000529002 SNURFQ9Y675 71 aa5.94□□□□□ -1.46
SSRP1-204ENST00000529002 A0A1B0GU33 70 aa5.91□□□□□ -1.46
SSRP1-204ENST00000529002 SERP1Q9Y6X1 66 aa5.91□□□□□ -1.46
SSRP1-204ENST00000529002 KRTAP5-2Q701N4 177 aa5.9□□□□□ -1.46
SSRP1-204ENST00000529002 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
SSRP1-204ENST00000529002 SEC61GP60059 68 aa5.87□□□□□ -1.47
SSRP1-204ENST00000529002 A8MU10 97 aa5.83□□□□□ -1.48
SSRP1-204ENST00000529002 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
SSRP1-204ENST00000529002 COA5Q86WW8 74 aa5.8□□□□□ -1.48
SSRP1-204ENST00000529002 SMIM20Q8N5G0 67 aa5.74□□□□□ -1.49
SSRP1-204ENST00000529002 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
SSRP1-204ENST00000529002 OBSCNQ5VST9 7968 aa5.71□□□□□ -1.5
SSRP1-204ENST00000529002 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
SSRP1-204ENST00000529002 MT1AP04731 61 aa5.64□□□□□ -1.51
SSRP1-204ENST00000529002 J3QR89 54 aa5.61□□□□□ -1.51
SSRP1-204ENST00000529002 K7ERU9 68 aa5.59□□□□□ -1.51
SSRP1-204ENST00000529002 KRTAP6-2Q3LI66 62 aa5.58□□□□□ -1.52
SSRP1-204ENST00000529002 SERP2Q8N6R1 65 aa5.49□□□□□ -1.53
SSRP1-204ENST00000529002 A0A1B0GU69 56 aa5.48□□□□□ -1.53
SSRP1-204ENST00000529002 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
SSRP1-204ENST00000529002 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
SSRP1-204ENST00000529002 KRTAP5-1Q6L8H4 278 aa5.44□□□□□ -1.54
SSRP1-204ENST00000529002 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
SSRP1-204ENST00000529002 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
SSRP1-204ENST00000529002 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
SSRP1-204ENST00000529002 PCP4P48539 62 aa5.31□□□□□ -1.56
SSRP1-204ENST00000529002 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
SSRP1-204ENST00000529002 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
SSRP1-204ENST00000529002 MT3P25713 68 aa5.16□□□□□ -1.58
SSRP1-204ENST00000529002 H7BZZ5 65 aa5.15□□□□□ -1.59
SSRP1-204ENST00000529002 CCDC179H3BU77 68 aa5.11□□□□□ -1.59
SSRP1-204ENST00000529002 PRR15LQ9BU68 103 aa5.06□□□□□ -1.6
SSRP1-204ENST00000529002 COX7CP15954 63 aa5.04□□□□□ -1.6
SSRP1-204ENST00000529002 A0A0A0MQY5 61 aa4.89□□□□□ -1.63
SSRP1-204ENST00000529002 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
SSRP1-204ENST00000529002 UQCR11O14957 56 aa4.88□□□□□ -1.63
SSRP1-204ENST00000529002 TMEM258P61165 79 aa4.86□□□□□ -1.63
SSRP1-204ENST00000529002 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
SSRP1-204ENST00000529002 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
SSRP1-204ENST00000529002 ATP5EP56381 51 aaPredicted RBP4.74□□□□□ -1.65
SSRP1-204ENST00000529002 MIR22HGQ0VDD5 57 aa4.74□□□□□ -1.65
SSRP1-204ENST00000529002 RPS28P62857 69 aaKnown RBP4.71□□□□□ -1.66
SSRP1-204ENST00000529002 K7ERS5 55 aa4.7□□□□□ -1.66
SSRP1-204ENST00000529002 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
SSRP1-204ENST00000529002 Q1T7F1 81 aa4.48□□□□□ -1.69
SSRP1-204ENST00000529002 PSPHP1O15172 72 aa4.43□□□□□ -1.7
SSRP1-204ENST00000529002 V9GYY9 64 aa4.43□□□□□ -1.7
SSRP1-204ENST00000529002 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
SSRP1-204ENST00000529002 ROMO1P60602 79 aa4.32□□□□□ -1.72
SSRP1-204ENST00000529002 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
SSRP1-204ENST00000529002 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
SSRP1-204ENST00000529002 A6NED7 52 aa4.28□□□□□ -1.72
SSRP1-204ENST00000529002 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
SSRP1-204ENST00000529002 PHGR1C9JFL3 82 aa4.22□□□□□ -1.73
SSRP1-204ENST00000529002 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
SSRP1-204ENST00000529002 PMAIP1Q13794 54 aa4.04□□□□□ -1.76
SSRP1-204ENST00000529002 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
SSRP1-204ENST00000529002 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.03□□□□□ -1.76
SSRP1-204ENST00000529002 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
SSRP1-204ENST00000529002 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
SSRP1-204ENST00000529002 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
SSRP1-204ENST00000529002 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
SSRP1-204ENST00000529002 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
SSRP1-204ENST00000529002 MUC19Q7Z5P9 8384 aa3.61□□□□□ -1.83
SSRP1-204ENST00000529002 LCE3EQ5T5B0 92 aa3.42□□□□□ -1.86
SSRP1-204ENST00000529002 KRTAP21-1Q3LI58 79 aa3.15□□□□□ -1.91
SSRP1-204ENST00000529002 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
SSRP1-204ENST00000529002 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
SSRP1-204ENST00000529002 INE1O15225 51 aa2.5□□□□□ -2.01
SSRP1-204ENST00000529002 PRM1P04553 51 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 102.9 ms