RNA–Protein interactions for RNA: ENST00000528984.5

ATG13-213, Transcript of autophagy related 13, humanhuman

TSL 4

Gene ATG13, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-213ENST00000528984 KRTAP9-9Q9BYP9 154 aa3.88□□□□□ -1.79
ATG13-213ENST00000528984 KRTAP9-4Q9BYQ2 154 aa3.88□□□□□ -1.79
ATG13-213ENST00000528984 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
ATG13-213ENST00000528984 MACF1Q9UPN3 7388 aaKnown RBP3.84□□□□□ -1.79
ATG13-213ENST00000528984 MT1EP04732 61 aa3.8□□□□□ -1.8
ATG13-213ENST00000528984 SPRR2FQ96RM1 72 aa3.79□□□□□ -1.8
ATG13-213ENST00000528984 LCE4AQ5TA78 99 aa3.75□□□□□ -1.81
ATG13-213ENST00000528984 MT1LQ93083 61 aa3.72□□□□□ -1.81
ATG13-213ENST00000528984 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
ATG13-213ENST00000528984 SYNE2Q8WXH0 6885 aaKnown RBP3.7□□□□□ -1.82
ATG13-213ENST00000528984 KRTAP9-7A8MTY7 169 aa3.69□□□□□ -1.82
ATG13-213ENST00000528984 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
ATG13-213ENST00000528984 KRTAP4-7Q9BYR0 210 aa3.69□□□□□ -1.82
ATG13-213ENST00000528984 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
ATG13-213ENST00000528984 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
ATG13-213ENST00000528984 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
ATG13-213ENST00000528984 SPRR5A0A1B0GTR4 108 aa3.65□□□□□ -1.83
ATG13-213ENST00000528984 MT1GP13640 62 aa3.65□□□□□ -1.83
ATG13-213ENST00000528984 SPRR2EP22531 72 aa3.6□□□□□ -1.83
ATG13-213ENST00000528984 SPRR2BP35325 72 aa3.6□□□□□ -1.83
ATG13-213ENST00000528984 SPRR2AP35326 72 aa3.6□□□□□ -1.83
ATG13-213ENST00000528984 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
ATG13-213ENST00000528984 MT1MQ8N339 61 aa3.59□□□□□ -1.83
ATG13-213ENST00000528984 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
ATG13-213ENST00000528984 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
ATG13-213ENST00000528984 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
ATG13-213ENST00000528984 KRTAP4-2Q9BYR5 136 aa3.55□□□□□ -1.84
ATG13-213ENST00000528984 SPRR2DP22532 72 aa3.48□□□□□ -1.85
ATG13-213ENST00000528984 KRTAP4-3Q9BYR4 195 aa3.48□□□□□ -1.85
ATG13-213ENST00000528984 KRTAP4-11Q9BYQ6 195 aa3.46□□□□□ -1.86
ATG13-213ENST00000528984 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
ATG13-213ENST00000528984 INE1O15225 51 aa3.42□□□□□ -1.86
ATG13-213ENST00000528984 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
ATG13-213ENST00000528984 NEBP20929 6669 aa3.4□□□□□ -1.87
ATG13-213ENST00000528984 KRTAP5-3Q6L8H2 238 aa3.38□□□□□ -1.87
ATG13-213ENST00000528984 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
ATG13-213ENST00000528984 MT3P25713 68 aa3.3□□□□□ -1.88
ATG13-213ENST00000528984 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
ATG13-213ENST00000528984 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
ATG13-213ENST00000528984 MT1AP04731 61 aa3.19□□□□□ -1.9
ATG13-213ENST00000528984 KRTAP20-1Q3LI63 56 aa3.19□□□□□ -1.9
ATG13-213ENST00000528984 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
ATG13-213ENST00000528984 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
ATG13-213ENST00000528984 KRTAP2-2Q9BYT5 123 aa3.15□□□□□ -1.91
ATG13-213ENST00000528984 KRTAP6-1Q3LI64 71 aa3.13□□□□□ -1.91
ATG13-213ENST00000528984 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
ATG13-213ENST00000528984 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
ATG13-213ENST00000528984 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
ATG13-213ENST00000528984 MT4P47944 62 aa3.01□□□□□ -1.93
ATG13-213ENST00000528984 KRTAP6-2Q3LI66 62 aa2.9□□□□□ -1.95
ATG13-213ENST00000528984 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
ATG13-213ENST00000528984 LCE1FQ5T754 118 aa2.89□□□□□ -1.95
ATG13-213ENST00000528984 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
ATG13-213ENST00000528984 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
ATG13-213ENST00000528984 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
ATG13-213ENST00000528984 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
ATG13-213ENST00000528984 OBSCNQ5VST9 7968 aa2.68□□□□□ -1.98
ATG13-213ENST00000528984 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
ATG13-213ENST00000528984 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2.01
ATG13-213ENST00000528984 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
ATG13-213ENST00000528984 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.47□□□□□ -2.01
ATG13-213ENST00000528984 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
ATG13-213ENST00000528984 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
ATG13-213ENST00000528984 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
ATG13-213ENST00000528984 KRTAP5-1Q6L8H4 278 aa2.39□□□□□ -2.03
ATG13-213ENST00000528984 PRM1P04553 51 aa2.37□□□□□ -2.03
ATG13-213ENST00000528984 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
ATG13-213ENST00000528984 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
ATG13-213ENST00000528984 KRTAP5-7Q6L8G8 165 aa2.31□□□□□ -2.04
ATG13-213ENST00000528984 MUC5ACP98088 5654 aa2.29□□□□□ -2.04
ATG13-213ENST00000528984 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
ATG13-213ENST00000528984 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
ATG13-213ENST00000528984 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
ATG13-213ENST00000528984 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
ATG13-213ENST00000528984 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
ATG13-213ENST00000528984 MUC19Q7Z5P9 8384 aa1.57□□□□□ -2.16
ATG13-213ENST00000528984 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
ATG13-213ENST00000528984 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 96.1 ms