RNA–Protein interactions for RNA: ENST00000528630.1

RCN1-204, Transcript of reticulocalbin 1, humanhuman

TSL 3

Gene RCN1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-204ENST00000528630 KRTAP2-4Q9BYR9 128 aa1.15□□□□□ -2.23
RCN1-204ENST00000528630 KRTAP2-1Q9BYU5 128 aa1.15□□□□□ -2.23
RCN1-204ENST00000528630 PKHD1L1Q86WI1 4243 aa1.15□□□□□ -2.23
RCN1-204ENST00000528630 UBR4Q5T4S7 5183 aa1.14□□□□□ -2.23
RCN1-204ENST00000528630 DYNC1H1Q14204 4646 aaKnown RBP1.13□□□□□ -2.23
RCN1-204ENST00000528630 VPS13BQ7Z7G8 4022 aa1.13□□□□□ -2.23
RCN1-204ENST00000528630 APOBP04114 4563 aaKnown RBP1.13□□□□□ -2.23
RCN1-204ENST00000528630 FLGP20930 4061 aaPredicted RBP1.12□□□□□ -2.23
RCN1-204ENST00000528630 KRTAP12-3P60328 96 aa1.11□□□□□ -2.23
RCN1-204ENST00000528630 LRP1BQ9NZR2 4599 aa1.11□□□□□ -2.23
RCN1-204ENST00000528630 KRTAP10-4P60372 401 aaPredicted RBP1.1□□□□□ -2.23
RCN1-204ENST00000528630 LRP1Q07954 4544 aaKnown RBP1.1□□□□□ -2.23
RCN1-204ENST00000528630 KRTAP12-4P60329 112 aa1.09□□□□□ -2.23
RCN1-204ENST00000528630 FAT1Q14517 4588 aa1.09□□□□□ -2.23
RCN1-204ENST00000528630 FAT3Q8TDW7 4589 aa1.08□□□□□ -2.24
RCN1-204ENST00000528630 KRTAP6-3Q3LI67 103 aa1.08□□□□□ -2.24
RCN1-204ENST00000528630 DNAH5Q8TE73 4624 aa1.08□□□□□ -2.24
RCN1-204ENST00000528630 TNXBP22105 4242 aa1.07□□□□□ -2.24
RCN1-204ENST00000528630 RNF213Q63HN8 5207 aa1.07□□□□□ -2.24
RCN1-204ENST00000528630 SMR3BP02814 79 aaPredicted RBP1.06□□□□□ -2.24
RCN1-204ENST00000528630 HMCN2Q8NDA2 5059 aa1.06□□□□□ -2.24
RCN1-204ENST00000528630 SPRR2GQ9BYE4 73 aa1.05□□□□□ -2.24
RCN1-204ENST00000528630 LRP2P98164 4655 aa1.04□□□□□ -2.24
RCN1-204ENST00000528630 KRTAP4-1Q9BYQ7 146 aa1.04□□□□□ -2.24
RCN1-204ENST00000528630 MT1HL1P0DM35 61 aa1.03□□□□□ -2.24
RCN1-204ENST00000528630 MUC2Q02817 5179 aa1.01□□□□□ -2.25
RCN1-204ENST00000528630 LPAP08519 4548 aa1□□□□□ -2.25
RCN1-204ENST00000528630 KRTAP19-5Q3LI72 72 aa1□□□□□ -2.25
RCN1-204ENST00000528630 CRCT1Q9UGL9 99 aa0.99□□□□□ -2.25
RCN1-204ENST00000528630 FAT4Q6V0I7 4981 aa0.97□□□□□ -2.25
RCN1-204ENST00000528630 KRTAP19-2Q3LHN2 52 aa0.97□□□□□ -2.25
RCN1-204ENST00000528630 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
RCN1-204ENST00000528630 MT1AP04731 61 aa0.95□□□□□ -2.26
RCN1-204ENST00000528630 MUC17Q685J3 4493 aa0.93□□□□□ -2.26
RCN1-204ENST00000528630 PRM1P04553 51 aa0.93□□□□□ -2.26
RCN1-204ENST00000528630 MT1XP80297 61 aa0.93□□□□□ -2.26
RCN1-204ENST00000528630 FSIP2Q5CZC0 6907 aa0.92□□□□□ -2.26
RCN1-204ENST00000528630 MT1EP04732 61 aa0.92□□□□□ -2.26
RCN1-204ENST00000528630 MT1LQ93083 61 aa0.9□□□□□ -2.27
RCN1-204ENST00000528630 FCGBPQ9Y6R7 5405 aaPredicted RBP0.87□□□□□ -2.27
RCN1-204ENST00000528630 MT1HP80294 61 aa0.87□□□□□ -2.27
RCN1-204ENST00000528630 SSPOA2VEC9 5147 aa0.86□□□□□ -2.27
RCN1-204ENST00000528630 MT1BP07438 61 aa0.86□□□□□ -2.27
RCN1-204ENST00000528630 SPRR2AP35326 72 aa0.85□□□□□ -2.27
RCN1-204ENST00000528630 USH2AO75445 5202 aa0.85□□□□□ -2.27
RCN1-204ENST00000528630 SPRR2BP35325 72 aa0.84□□□□□ -2.27
RCN1-204ENST00000528630 SPRR2FQ96RM1 72 aa0.84□□□□□ -2.27
RCN1-204ENST00000528630 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
RCN1-204ENST00000528630 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
RCN1-204ENST00000528630 SPRR2DP22532 72 aa0.81□□□□□ -2.28
RCN1-204ENST00000528630 MT2AP02795 61 aa0.8□□□□□ -2.28
RCN1-204ENST00000528630 KRTAP19-6Q3LI70 58 aa0.8□□□□□ -2.28
RCN1-204ENST00000528630 MT1FP04733 61 aa0.79□□□□□ -2.28
RCN1-204ENST00000528630 SPRR2EP22531 72 aa0.79□□□□□ -2.28
RCN1-204ENST00000528630 KRTAP20-1Q3LI63 56 aa0.77□□□□□ -2.29
RCN1-204ENST00000528630 MACF1Q9UPN3 7388 aaKnown RBP0.77□□□□□ -2.29
RCN1-204ENST00000528630 MUC12Q9UKN1 5478 aa0.77□□□□□ -2.29
RCN1-204ENST00000528630 SYNE1Q8NF91 8797 aaKnown RBP0.76□□□□□ -2.29
RCN1-204ENST00000528630 SYNE2Q8WXH0 6885 aaKnown RBP0.76□□□□□ -2.29
RCN1-204ENST00000528630 KMT2DO14686 5537 aa0.76□□□□□ -2.29
RCN1-204ENST00000528630 MT1GP13640 62 aa0.75□□□□□ -2.29
RCN1-204ENST00000528630 MT1MQ8N339 61 aa0.73□□□□□ -2.29
RCN1-204ENST00000528630 MDN1Q9NU22 5596 aa0.72□□□□□ -2.29
RCN1-204ENST00000528630 NEBP20929 6669 aa0.72□□□□□ -2.29
RCN1-204ENST00000528630 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
RCN1-204ENST00000528630 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
RCN1-204ENST00000528630 KRTAP6-1Q3LI64 71 aa0.67□□□□□ -2.3
RCN1-204ENST00000528630 KRTAP5-10Q6L8G5 202 aa0.66□□□□□ -2.3
RCN1-204ENST00000528630 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
RCN1-204ENST00000528630 DSTQ03001 7570 aaKnown RBP0.61□□□□□ -2.31
RCN1-204ENST00000528630 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
RCN1-204ENST00000528630 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
RCN1-204ENST00000528630 MT4P47944 62 aa0.58□□□□□ -2.32
RCN1-204ENST00000528630 MUC16Q8WXI7 14507 aa0.57□□□□□ -2.32
RCN1-204ENST00000528630 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
RCN1-204ENST00000528630 KRTAP20-2Q3LI61 65 aa0.55□□□□□ -2.32
RCN1-204ENST00000528630 MUC5ACP98088 5654 aa0.51□□□□□ -2.33
RCN1-204ENST00000528630 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 377 ms