RNA–Protein interactions for RNA: ENST00000528252.5

SOX6-210, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SOX6, Length 2,707 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-210ENST00000528252 LCE1FQ5T754 118 aa2.99□□□□□ -1.93
SOX6-210ENST00000528252 LOC100996750A0A140TA64 210 aa2.96□□□□□ -1.94
SOX6-210ENST00000528252 KRTAP4-6Q9BYQ5 205 aa2.96□□□□□ -1.94
SOX6-210ENST00000528252 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
SOX6-210ENST00000528252 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
SOX6-210ENST00000528252 MT1EP04732 61 aa2.92□□□□□ -1.94
SOX6-210ENST00000528252 KRTAP9-2Q9BYQ4 174 aa2.91□□□□□ -1.94
SOX6-210ENST00000528252 MT1LQ93083 61 aa2.89□□□□□ -1.95
SOX6-210ENST00000528252 KRTAP4-7Q9BYR0 210 aa2.87□□□□□ -1.95
SOX6-210ENST00000528252 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
SOX6-210ENST00000528252 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.96
SOX6-210ENST00000528252 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
SOX6-210ENST00000528252 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
SOX6-210ENST00000528252 MACF1Q9UPN3 7388 aaKnown RBP2.82□□□□□ -1.96
SOX6-210ENST00000528252 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
SOX6-210ENST00000528252 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
SOX6-210ENST00000528252 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
SOX6-210ENST00000528252 LCE1AQ5T7P2 110 aa2.8□□□□□ -1.96
SOX6-210ENST00000528252 SPRR2FQ96RM1 72 aa2.79□□□□□ -1.96
SOX6-210ENST00000528252 KRTAP19-3Q7Z4W3 81 aa2.78□□□□□ -1.96
SOX6-210ENST00000528252 MT1GP13640 62 aa2.76□□□□□ -1.97
SOX6-210ENST00000528252 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
SOX6-210ENST00000528252 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
SOX6-210ENST00000528252 SYNE2Q8WXH0 6885 aaKnown RBP2.74□□□□□ -1.97
SOX6-210ENST00000528252 MT1MQ8N339 61 aa2.74□□□□□ -1.97
SOX6-210ENST00000528252 MDN1Q9NU22 5596 aa2.71□□□□□ -1.98
SOX6-210ENST00000528252 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.7□□□□□ -1.98
SOX6-210ENST00000528252 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
SOX6-210ENST00000528252 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
SOX6-210ENST00000528252 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
SOX6-210ENST00000528252 LCE1DQ5T752 114 aa2.66□□□□□ -1.98
SOX6-210ENST00000528252 LCE3BQ5TA77 95 aa2.61□□□□□ -1.99
SOX6-210ENST00000528252 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
SOX6-210ENST00000528252 SPRR2EP22531 72 aa2.6□□□□□ -1.99
SOX6-210ENST00000528252 SPRR2BP35325 72 aa2.6□□□□□ -1.99
SOX6-210ENST00000528252 SPRR2AP35326 72 aa2.6□□□□□ -1.99
SOX6-210ENST00000528252 MT3P25713 68 aa2.58□□□□□ -2
SOX6-210ENST00000528252 KRTAP6-3Q3LI67 103 aa2.56□□□□□ -2
SOX6-210ENST00000528252 LCE3DQ9BYE3 92 aa2.51□□□□□ -2.01
SOX6-210ENST00000528252 SPRR2DP22532 72 aa2.49□□□□□ -2.01
SOX6-210ENST00000528252 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
SOX6-210ENST00000528252 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
SOX6-210ENST00000528252 MT1AP04731 61 aa2.43□□□□□ -2.02
SOX6-210ENST00000528252 SYNE1Q8NF91 8797 aaKnown RBP2.43□□□□□ -2.02
SOX6-210ENST00000528252 KRTAP4-9Q9BYQ8 210 aa2.4□□□□□ -2.03
SOX6-210ENST00000528252 NEBP20929 6669 aa2.38□□□□□ -2.03
SOX6-210ENST00000528252 PRM1P04553 51 aa2.37□□□□□ -2.03
SOX6-210ENST00000528252 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
SOX6-210ENST00000528252 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
SOX6-210ENST00000528252 KRTAP4-2Q9BYR5 136 aa2.3□□□□□ -2.04
SOX6-210ENST00000528252 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
SOX6-210ENST00000528252 KRTAP5-4Q6L8H1 288 aa2.26□□□□□ -2.05
SOX6-210ENST00000528252 KRTAP6-2Q3LI66 62 aa2.23□□□□□ -2.05
SOX6-210ENST00000528252 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
SOX6-210ENST00000528252 MT4P47944 62 aa2.2□□□□□ -2.06
SOX6-210ENST00000528252 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.06
SOX6-210ENST00000528252 HMCN1Q96RW7 5635 aa2.13□□□□□ -2.07
SOX6-210ENST00000528252 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
SOX6-210ENST00000528252 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
SOX6-210ENST00000528252 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
SOX6-210ENST00000528252 GPR98Q8WXG9 6306 aa1.83□□□□□ -2.12
SOX6-210ENST00000528252 LCE1BQ5T7P3 118 aa1.82□□□□□ -2.12
SOX6-210ENST00000528252 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
SOX6-210ENST00000528252 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
SOX6-210ENST00000528252 LCE1CQ5T751 118 aa1.78□□□□□ -2.12
SOX6-210ENST00000528252 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
SOX6-210ENST00000528252 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
SOX6-210ENST00000528252 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
SOX6-210ENST00000528252 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
SOX6-210ENST00000528252 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
SOX6-210ENST00000528252 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.16
SOX6-210ENST00000528252 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.16
SOX6-210ENST00000528252 KRTAP21-1Q3LI58 79 aa1.49□□□□□ -2.17
SOX6-210ENST00000528252 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
SOX6-210ENST00000528252 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
SOX6-210ENST00000528252 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
SOX6-210ENST00000528252 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 5.2 ms