RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
CAPN1-213ENST00000527897 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
CAPN1-213ENST00000527897 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
CAPN1-213ENST00000527897 PSPHP1O15172 72 aa5.37□□□□□ -1.55
CAPN1-213ENST00000527897 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
CAPN1-213ENST00000527897 PCP4P48539 62 aa5.36□□□□□ -1.55
CAPN1-213ENST00000527897 K7ERS5 55 aa5.35□□□□□ -1.55
CAPN1-213ENST00000527897 LCE1DQ5T752 114 aa5.34□□□□□ -1.55
CAPN1-213ENST00000527897 MT4P47944 62 aa5.33□□□□□ -1.56
CAPN1-213ENST00000527897 V9GYY9 64 aa5.33□□□□□ -1.56
CAPN1-213ENST00000527897 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
CAPN1-213ENST00000527897 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
CAPN1-213ENST00000527897 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
CAPN1-213ENST00000527897 Q1T7F1 81 aa5.27□□□□□ -1.57
CAPN1-213ENST00000527897 HMCN1Q96RW7 5635 aa5.27□□□□□ -1.57
CAPN1-213ENST00000527897 A6NED7 52 aa5.19□□□□□ -1.58
CAPN1-213ENST00000527897 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
CAPN1-213ENST00000527897 RPS28P62857 69 aaKnown RBP5.15□□□□□ -1.59
CAPN1-213ENST00000527897 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
CAPN1-213ENST00000527897 AHNAK2Q8IVF2 5795 aa5.1□□□□□ -1.59
CAPN1-213ENST00000527897 CDC42SE1Q9NRR8 79 aa5.05□□□□□ -1.6
CAPN1-213ENST00000527897 KRTAP23-1A1A580 65 aa5.04□□□□□ -1.6
CAPN1-213ENST00000527897 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
CAPN1-213ENST00000527897 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
CAPN1-213ENST00000527897 KRTAP5-5Q701N2 237 aaPredicted RBP5□□□□□ -1.61
CAPN1-213ENST00000527897 KRTAP5-10Q6L8G5 202 aa4.98□□□□□ -1.61
CAPN1-213ENST00000527897 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
CAPN1-213ENST00000527897 ROMO1P60602 79 aa4.96□□□□□ -1.62
CAPN1-213ENST00000527897 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
CAPN1-213ENST00000527897 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
CAPN1-213ENST00000527897 KRTAP12-4P60329 112 aa4.93□□□□□ -1.62
CAPN1-213ENST00000527897 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
CAPN1-213ENST00000527897 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
CAPN1-213ENST00000527897 KRTAP5-7Q6L8G8 165 aa4.84□□□□□ -1.63
CAPN1-213ENST00000527897 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
CAPN1-213ENST00000527897 MT1AP04731 61 aa4.69□□□□□ -1.66
CAPN1-213ENST00000527897 KRTAP6-1Q3LI64 71 aa4.69□□□□□ -1.66
CAPN1-213ENST00000527897 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.67
CAPN1-213ENST00000527897 BRK1Q8WUW1 75 aa4.55□□□□□ -1.68
CAPN1-213ENST00000527897 KRTAP5-2Q701N4 177 aa4.54□□□□□ -1.68
CAPN1-213ENST00000527897 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
CAPN1-213ENST00000527897 KRTAP4-11Q9BYQ6 195 aa4.5□□□□□ -1.69
CAPN1-213ENST00000527897 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
CAPN1-213ENST00000527897 OBSCNQ5VST9 7968 aa4.38□□□□□ -1.71
CAPN1-213ENST00000527897 KRTAP5-8O75690 187 aa4.34□□□□□ -1.71
CAPN1-213ENST00000527897 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
CAPN1-213ENST00000527897 MT3P25713 68 aa4.31□□□□□ -1.72
CAPN1-213ENST00000527897 PRO0628Q9UI54 55 aa4.28□□□□□ -1.72
CAPN1-213ENST00000527897 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
CAPN1-213ENST00000527897 MUC5ACP98088 5654 aa4.22□□□□□ -1.73
CAPN1-213ENST00000527897 MUC5BQ9HC84 5762 aaPredicted RBP4.16□□□□□ -1.74
CAPN1-213ENST00000527897 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
CAPN1-213ENST00000527897 KRTAP5-1Q6L8H4 278 aa4.09□□□□□ -1.75
CAPN1-213ENST00000527897 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
CAPN1-213ENST00000527897 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
CAPN1-213ENST00000527897 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
CAPN1-213ENST00000527897 SVIPQ8NHG7 77 aa3.82□□□□□ -1.8
CAPN1-213ENST00000527897 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
CAPN1-213ENST00000527897 KRTAP4-2Q9BYR5 136 aa3.71□□□□□ -1.82
CAPN1-213ENST00000527897 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
CAPN1-213ENST00000527897 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
CAPN1-213ENST00000527897 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
CAPN1-213ENST00000527897 KRTAP4-12Q9BQ66 201 aa3.42□□□□□ -1.86
CAPN1-213ENST00000527897 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
CAPN1-213ENST00000527897 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
CAPN1-213ENST00000527897 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
CAPN1-213ENST00000527897 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CAPN1-213ENST00000527897 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
CAPN1-213ENST00000527897 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
CAPN1-213ENST00000527897 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
CAPN1-213ENST00000527897 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CAPN1-213ENST00000527897 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
CAPN1-213ENST00000527897 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
CAPN1-213ENST00000527897 INE1O15225 51 aa2.57□□□□□ -2
CAPN1-213ENST00000527897 PRM1P04553 51 aa2.56□□□□□ -2
CAPN1-213ENST00000527897 H3BS24 57 aa2.33□□□□□ -2.04
CAPN1-213ENST00000527897 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
CAPN1-213ENST00000527897 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 64.4 ms