RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 MT1EP04732 61 aa4.02□□□□□ -1.77
TSKU-203ENST00000527881 MT1GP13640 62 aa4.01□□□□□ -1.77
TSKU-203ENST00000527881 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
TSKU-203ENST00000527881 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
TSKU-203ENST00000527881 LCE3BQ5TA77 95 aa3.88□□□□□ -1.79
TSKU-203ENST00000527881 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
TSKU-203ENST00000527881 SYNE1Q8NF91 8797 aaKnown RBP3.83□□□□□ -1.8
TSKU-203ENST00000527881 FCGBPQ9Y6R7 5405 aaPredicted RBP3.81□□□□□ -1.8
TSKU-203ENST00000527881 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
TSKU-203ENST00000527881 PRM1P04553 51 aa3.76□□□□□ -1.81
TSKU-203ENST00000527881 MT1MQ8N339 61 aa3.75□□□□□ -1.81
TSKU-203ENST00000527881 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
TSKU-203ENST00000527881 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
TSKU-203ENST00000527881 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
TSKU-203ENST00000527881 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
TSKU-203ENST00000527881 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
TSKU-203ENST00000527881 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
TSKU-203ENST00000527881 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
TSKU-203ENST00000527881 LCE5AQ5TCM9 118 aa3.67□□□□□ -1.82
TSKU-203ENST00000527881 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
TSKU-203ENST00000527881 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
TSKU-203ENST00000527881 MT1AP04731 61 aa3.57□□□□□ -1.84
TSKU-203ENST00000527881 KRTAP5-5Q701N2 237 aaPredicted RBP3.56□□□□□ -1.84
TSKU-203ENST00000527881 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
TSKU-203ENST00000527881 KRTAP9-4Q9BYQ2 154 aa3.54□□□□□ -1.84
TSKU-203ENST00000527881 KRTAP9-6A0A140TA67 174 aa3.54□□□□□ -1.84
TSKU-203ENST00000527881 KRTAP6-1Q3LI64 71 aa3.53□□□□□ -1.84
TSKU-203ENST00000527881 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
TSKU-203ENST00000527881 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
TSKU-203ENST00000527881 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
TSKU-203ENST00000527881 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
TSKU-203ENST00000527881 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
TSKU-203ENST00000527881 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
TSKU-203ENST00000527881 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
TSKU-203ENST00000527881 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
TSKU-203ENST00000527881 LCE1DQ5T752 114 aa3.32□□□□□ -1.88
TSKU-203ENST00000527881 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
TSKU-203ENST00000527881 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
TSKU-203ENST00000527881 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
TSKU-203ENST00000527881 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
TSKU-203ENST00000527881 SPRR2EP22531 72 aa3.12□□□□□ -1.91
TSKU-203ENST00000527881 SPRR2BP35325 72 aa3.12□□□□□ -1.91
TSKU-203ENST00000527881 SPRR2AP35326 72 aa3.12□□□□□ -1.91
TSKU-203ENST00000527881 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
TSKU-203ENST00000527881 MT3P25713 68 aa3.09□□□□□ -1.91
TSKU-203ENST00000527881 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
TSKU-203ENST00000527881 SPRR2DP22532 72 aa3.01□□□□□ -1.93
TSKU-203ENST00000527881 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
TSKU-203ENST00000527881 NEBP20929 6669 aa2.88□□□□□ -1.95
TSKU-203ENST00000527881 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.96
TSKU-203ENST00000527881 MT4P47944 62 aa2.64□□□□□ -1.99
TSKU-203ENST00000527881 MUC5ACP98088 5654 aa2.63□□□□□ -1.99
TSKU-203ENST00000527881 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
TSKU-203ENST00000527881 KRTAP4-6Q9BYQ5 205 aa2.59□□□□□ -1.99
TSKU-203ENST00000527881 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
TSKU-203ENST00000527881 KRTAP5-4Q6L8H1 288 aa2.53□□□□□ -2
TSKU-203ENST00000527881 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
TSKU-203ENST00000527881 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
TSKU-203ENST00000527881 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
TSKU-203ENST00000527881 KRTAP5-1Q6L8H4 278 aa2.33□□□□□ -2.04
TSKU-203ENST00000527881 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
TSKU-203ENST00000527881 KRTAP4-12Q9BQ66 201 aa2.27□□□□□ -2.05
TSKU-203ENST00000527881 KRTAP21-1Q3LI58 79 aa2.25□□□□□ -2.05
TSKU-203ENST00000527881 KRTAP5-3Q6L8H2 238 aa2.25□□□□□ -2.05
TSKU-203ENST00000527881 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
TSKU-203ENST00000527881 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
TSKU-203ENST00000527881 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
TSKU-203ENST00000527881 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
TSKU-203ENST00000527881 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
TSKU-203ENST00000527881 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
TSKU-203ENST00000527881 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
TSKU-203ENST00000527881 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.98□□□□□ -2.09
TSKU-203ENST00000527881 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
TSKU-203ENST00000527881 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
TSKU-203ENST00000527881 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
TSKU-203ENST00000527881 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
TSKU-203ENST00000527881 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 161.2 ms