RNA–Protein interactions for RNA: ENST00000527823.5

USP48-212, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-212ENST00000527823 DMAC1Q96GE9 116 aa2.76□□□□□ -1.97
USP48-212ENST00000527823 SYNE1Q8NF91 8797 aaKnown RBP2.75□□□□□ -1.97
USP48-212ENST00000527823 A0A0D9SG42 100 aa2.75□□□□□ -1.97
USP48-212ENST00000527823 LINC00208Q96KT6 92 aa2.75□□□□□ -1.97
USP48-212ENST00000527823 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
USP48-212ENST00000527823 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
USP48-212ENST00000527823 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
USP48-212ENST00000527823 HIST1H4AP62805 103 aaKnown RBP2.67□□□□□ -1.98
USP48-212ENST00000527823 MP68P56378 58 aa2.65□□□□□ -1.99
USP48-212ENST00000527823 KRTAP12-4P60329 112 aa2.65□□□□□ -1.99
USP48-212ENST00000527823 TRAV7A0A075B6U4 112 aa2.64□□□□□ -1.99
USP48-212ENST00000527823 ATP5EP2Q5VTU8 51 aa2.64□□□□□ -1.99
USP48-212ENST00000527823 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
USP48-212ENST00000527823 SMIM6P0DI80 62 aa2.63□□□□□ -1.99
USP48-212ENST00000527823 V9GYY9 64 aa2.63□□□□□ -1.99
USP48-212ENST00000527823 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
USP48-212ENST00000527823 ETDBQ3ZM63 59 aa2.61□□□□□ -1.99
USP48-212ENST00000527823 H3BPC8 53 aa2.57□□□□□ -2
USP48-212ENST00000527823 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
USP48-212ENST00000527823 SPTSSBQ8NFR3 76 aa2.57□□□□□ -2
USP48-212ENST00000527823 SMIM26A0A096LP01 95 aa2.56□□□□□ -2
USP48-212ENST00000527823 FAM240AA0A1B0GVK7 77 aa2.54□□□□□ -2
USP48-212ENST00000527823 ACYP2P14621 99 aa2.54□□□□□ -2
USP48-212ENST00000527823 F8W1H4 67 aa2.53□□□□□ -2
USP48-212ENST00000527823 CHKB-CPT1BH3BT56 60 aa2.51□□□□□ -2.01
USP48-212ENST00000527823 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
USP48-212ENST00000527823 KRTAP12-1P59990 96 aa2.5□□□□□ -2.01
USP48-212ENST00000527823 COL5A1-AS1Q5SY13 56 aa2.5□□□□□ -2.01
USP48-212ENST00000527823 SPANXA2-OT1Q8N9U9 137 aa2.5□□□□□ -2.01
USP48-212ENST00000527823 GTF2H5Q6ZYL4 71 aa2.49□□□□□ -2.01
USP48-212ENST00000527823 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
USP48-212ENST00000527823 SPATA8Q6RVD6 105 aa2.47□□□□□ -2.01
USP48-212ENST00000527823 LINC00643Q86TS7 51 aa2.47□□□□□ -2.01
USP48-212ENST00000527823 TNP1P09430 55 aa2.43□□□□□ -2.02
USP48-212ENST00000527823 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
USP48-212ENST00000527823 SCGB1A1P11684 91 aa2.41□□□□□ -2.02
USP48-212ENST00000527823 KRTAP6-1Q3LI64 71 aa2.41□□□□□ -2.02
USP48-212ENST00000527823 LUZP6Q538Z0 58 aa2.41□□□□□ -2.02
USP48-212ENST00000527823 SMIM20Q8N5G0 67 aa2.41□□□□□ -2.02
USP48-212ENST00000527823 MT1AP04731 61 aa2.39□□□□□ -2.03
USP48-212ENST00000527823 A0A1B0GV90 55 aa2.38□□□□□ -2.03
USP48-212ENST00000527823 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
USP48-212ENST00000527823 A0A1B0GU33 70 aa2.33□□□□□ -2.04
USP48-212ENST00000527823 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
USP48-212ENST00000527823 PSPHP1O15172 72 aa2.31□□□□□ -2.04
USP48-212ENST00000527823 SERP1Q9Y6X1 66 aa2.31□□□□□ -2.04
USP48-212ENST00000527823 SNURFQ9Y675 71 aa2.3□□□□□ -2.04
USP48-212ENST00000527823 COA5Q86WW8 74 aa2.28□□□□□ -2.04
USP48-212ENST00000527823 RPS28P62857 69 aaKnown RBP2.26□□□□□ -2.05
USP48-212ENST00000527823 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
USP48-212ENST00000527823 KRTAP25-1Q3LHN0 102 aa2.22□□□□□ -2.05
USP48-212ENST00000527823 ANAPC13Q9BS18 74 aa2.16□□□□□ -2.06
USP48-212ENST00000527823 A0A1B0GU69 56 aa2.14□□□□□ -2.07
USP48-212ENST00000527823 K7ERU9 68 aa2.13□□□□□ -2.07
USP48-212ENST00000527823 KTN1-AS1Q86SY8 53 aa2.13□□□□□ -2.07
USP48-212ENST00000527823 SERP2Q8N6R1 65 aa2.13□□□□□ -2.07
USP48-212ENST00000527823 J3QR89 54 aa2.09□□□□□ -2.07
USP48-212ENST00000527823 CCDC179H3BU77 68 aa2.06□□□□□ -2.08
USP48-212ENST00000527823 K7ERS5 55 aa2.04□□□□□ -2.08
USP48-212ENST00000527823 BRK1Q8WUW1 75 aa2.02□□□□□ -2.09
USP48-212ENST00000527823 PRR15LQ9BU68 103 aa2.02□□□□□ -2.09
USP48-212ENST00000527823 H7BZZ5 65 aa1.98□□□□□ -2.09
USP48-212ENST00000527823 A6NED7 52 aa1.97□□□□□ -2.09
USP48-212ENST00000527823 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
USP48-212ENST00000527823 TMEM258P61165 79 aa1.95□□□□□ -2.1
USP48-212ENST00000527823 ROMO1P60602 79 aa1.89□□□□□ -2.11
USP48-212ENST00000527823 COX7CP15954 63 aa1.88□□□□□ -2.11
USP48-212ENST00000527823 UQCR11O14957 56 aa1.87□□□□□ -2.11
USP48-212ENST00000527823 LINC01558Q9Y6Z2 57 aa1.87□□□□□ -2.11
USP48-212ENST00000527823 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
USP48-212ENST00000527823 MIR22HGQ0VDD5 57 aa1.81□□□□□ -2.12
USP48-212ENST00000527823 Q1T7F1 81 aa1.78□□□□□ -2.12
USP48-212ENST00000527823 ATP5EP56381 51 aaPredicted RBP1.73□□□□□ -2.13
USP48-212ENST00000527823 CDC42SE1Q9NRR8 79 aa1.7□□□□□ -2.14
USP48-212ENST00000527823 INE1O15225 51 aa1.52□□□□□ -2.17
USP48-212ENST00000527823 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
USP48-212ENST00000527823 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
USP48-212ENST00000527823 PRM1P04553 51 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 25 ms