RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.37
VPS51-204ENST00000527646 KRTAP2-1Q9BYU5 128 aa6.52□□□□□ -1.37
VPS51-204ENST00000527646 KRTAP9-2Q9BYQ4 174 aa6.51□□□□□ -1.37
VPS51-204ENST00000527646 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
VPS51-204ENST00000527646 CRCT1Q9UGL9 99 aa6.34□□□□□ -1.39
VPS51-204ENST00000527646 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
VPS51-204ENST00000527646 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
VPS51-204ENST00000527646 SPRR2FQ96RM1 72 aa6.31□□□□□ -1.4
VPS51-204ENST00000527646 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
VPS51-204ENST00000527646 MT1GP13640 62 aa6.29□□□□□ -1.4
VPS51-204ENST00000527646 MT1MQ8N339 61 aa6.22□□□□□ -1.41
VPS51-204ENST00000527646 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.42
VPS51-204ENST00000527646 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
VPS51-204ENST00000527646 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.43
VPS51-204ENST00000527646 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
VPS51-204ENST00000527646 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
VPS51-204ENST00000527646 MDN1Q9NU22 5596 aa5.97□□□□□ -1.45
VPS51-204ENST00000527646 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
VPS51-204ENST00000527646 SPRR2EP22531 72 aa5.89□□□□□ -1.47
VPS51-204ENST00000527646 SPRR2BP35325 72 aa5.89□□□□□ -1.47
VPS51-204ENST00000527646 SPRR2AP35326 72 aa5.89□□□□□ -1.47
VPS51-204ENST00000527646 DSTQ03001 7570 aaKnown RBP5.87□□□□□ -1.47
VPS51-204ENST00000527646 KRTAP9-6A0A140TA67 174 aa5.84□□□□□ -1.47
VPS51-204ENST00000527646 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.47
VPS51-204ENST00000527646 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
VPS51-204ENST00000527646 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
VPS51-204ENST00000527646 SPRR2DP22532 72 aa5.66□□□□□ -1.5
VPS51-204ENST00000527646 MT1AP04731 61 aa5.55□□□□□ -1.52
VPS51-204ENST00000527646 KRTAP5-5Q701N2 237 aaPredicted RBP5.55□□□□□ -1.52
VPS51-204ENST00000527646 KRTAP6-1Q3LI64 71 aa5.52□□□□□ -1.53
VPS51-204ENST00000527646 LCE3BQ5TA77 95 aa5.5□□□□□ -1.53
VPS51-204ENST00000527646 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
VPS51-204ENST00000527646 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
VPS51-204ENST00000527646 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.56
VPS51-204ENST00000527646 NEBP20929 6669 aa5.33□□□□□ -1.56
VPS51-204ENST00000527646 LCE3DQ9BYE3 92 aa5.32□□□□□ -1.56
VPS51-204ENST00000527646 LCE3EQ5T5B0 92 aa5.29□□□□□ -1.56
VPS51-204ENST00000527646 KRTAP9-4Q9BYQ2 154 aa5.25□□□□□ -1.57
VPS51-204ENST00000527646 PRM1P04553 51 aa5.17□□□□□ -1.58
VPS51-204ENST00000527646 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
VPS51-204ENST00000527646 MT3P25713 68 aa5.04□□□□□ -1.6
VPS51-204ENST00000527646 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
VPS51-204ENST00000527646 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
VPS51-204ENST00000527646 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
VPS51-204ENST00000527646 MT4P47944 62 aa4.93□□□□□ -1.62
VPS51-204ENST00000527646 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
VPS51-204ENST00000527646 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
VPS51-204ENST00000527646 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
VPS51-204ENST00000527646 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
VPS51-204ENST00000527646 HMCN1Q96RW7 5635 aa4.75□□□□□ -1.65
VPS51-204ENST00000527646 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
VPS51-204ENST00000527646 KRTAP5-2Q701N4 177 aa4.71□□□□□ -1.66
VPS51-204ENST00000527646 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
VPS51-204ENST00000527646 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
VPS51-204ENST00000527646 MUC5ACP98088 5654 aa4.11□□□□□ -1.75
VPS51-204ENST00000527646 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
VPS51-204ENST00000527646 LCE1BQ5T7P3 118 aa4.07□□□□□ -1.76
VPS51-204ENST00000527646 KRTAP5-1Q6L8H4 278 aa4.04□□□□□ -1.76
VPS51-204ENST00000527646 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
VPS51-204ENST00000527646 LCE1CQ5T751 118 aa3.99□□□□□ -1.77
VPS51-204ENST00000527646 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
VPS51-204ENST00000527646 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.78
VPS51-204ENST00000527646 KRTAP5-8O75690 187 aa3.92□□□□□ -1.78
VPS51-204ENST00000527646 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
VPS51-204ENST00000527646 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
VPS51-204ENST00000527646 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
VPS51-204ENST00000527646 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.84
VPS51-204ENST00000527646 KRTAP9-9Q9BYP9 154 aa3.49□□□□□ -1.85
VPS51-204ENST00000527646 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
VPS51-204ENST00000527646 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
VPS51-204ENST00000527646 KRTAP21-1Q3LI58 79 aa3.34□□□□□ -1.88
VPS51-204ENST00000527646 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
VPS51-204ENST00000527646 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
VPS51-204ENST00000527646 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
VPS51-204ENST00000527646 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
VPS51-204ENST00000527646 PHGR1C9JFL3 82 aa2.99□□□□□ -1.93
VPS51-204ENST00000527646 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
VPS51-204ENST00000527646 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 95.3 ms