RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 V9GYY9 64 aa9.34□□□□□ -0.91
TSPAN4-217ENST00000527644 MT1MQ8N339 61 aa9.32□□□□□ -0.92
TSPAN4-217ENST00000527644 Q1T7F1 81 aa9.26□□□□□ -0.93
TSPAN4-217ENST00000527644 PSPHP1O15172 72 aa9.24□□□□□ -0.93
TSPAN4-217ENST00000527644 K7ERS5 55 aa9.21□□□□□ -0.94
TSPAN4-217ENST00000527644 KRTAP12-3P60328 96 aa9.17□□□□□ -0.94
TSPAN4-217ENST00000527644 KRTAP4-9Q9BYQ8 210 aa9.17□□□□□ -0.94
TSPAN4-217ENST00000527644 KRTAP25-1Q3LHN0 102 aa9.14□□□□□ -0.95
TSPAN4-217ENST00000527644 KRTAP4-3Q9BYR4 195 aa9.08□□□□□ -0.96
TSPAN4-217ENST00000527644 LCE4AQ5TA78 99 aa8.99□□□□□ -0.97
TSPAN4-217ENST00000527644 A6NED7 52 aa8.95□□□□□ -0.98
TSPAN4-217ENST00000527644 LCE1DQ5T752 114 aa8.93□□□□□ -0.98
TSPAN4-217ENST00000527644 KRTAP4-7Q9BYR0 210 aa8.91□□□□□ -0.98
TSPAN4-217ENST00000527644 RPS28P62857 69 aaKnown RBP8.86□□□□□ -0.99
TSPAN4-217ENST00000527644 MT4P47944 62 aa8.84□□□□□ -0.99
TSPAN4-217ENST00000527644 KRTAP5-4Q6L8H1 288 aa8.84□□□□□ -0.99
TSPAN4-217ENST00000527644 KRTAP23-1A1A580 65 aa8.83□□□□□ -1
TSPAN4-217ENST00000527644 HMCN1Q96RW7 5635 aa8.78□□□□□ -1
TSPAN4-217ENST00000527644 PCP4P48539 62 aa8.77□□□□□ -1.01
TSPAN4-217ENST00000527644 KRTAP19-4Q3LI73 84 aa8.72□□□□□ -1.01
TSPAN4-217ENST00000527644 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
TSPAN4-217ENST00000527644 AHNAK2Q8IVF2 5795 aa8.66□□□□□ -1.02
TSPAN4-217ENST00000527644 KRTAP15-1Q3LI76 137 aa8.61□□□□□ -1.03
TSPAN4-217ENST00000527644 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
TSPAN4-217ENST00000527644 ROMO1P60602 79 aa8.59□□□□□ -1.03
TSPAN4-217ENST00000527644 KRTAP5-5Q701N2 237 aaPredicted RBP8.55□□□□□ -1.04
TSPAN4-217ENST00000527644 KRTAP5-10Q6L8G5 202 aa8.5□□□□□ -1.05
TSPAN4-217ENST00000527644 LCE3CQ5T5A8 94 aa8.45□□□□□ -1.06
TSPAN4-217ENST00000527644 LOC100996750A0A140TA64 210 aa8.44□□□□□ -1.06
TSPAN4-217ENST00000527644 SPRR5A0A1B0GTR4 108 aa8.32□□□□□ -1.08
TSPAN4-217ENST00000527644 KRTAP12-4P60329 112 aa8.32□□□□□ -1.08
TSPAN4-217ENST00000527644 KRTAP20-2Q3LI61 65 aa8.32□□□□□ -1.08
TSPAN4-217ENST00000527644 SYNE1Q8NF91 8797 aaKnown RBP8.23□□□□□ -1.09
TSPAN4-217ENST00000527644 KRTAP5-7Q6L8G8 165 aa8.2□□□□□ -1.1
TSPAN4-217ENST00000527644 KRTAP5-3Q6L8H2 238 aa8.18□□□□□ -1.1
TSPAN4-217ENST00000527644 MT1AP04731 61 aa8□□□□□ -1.13
TSPAN4-217ENST00000527644 KRTAP9-6A8MVA2 160 aa7.95□□□□□ -1.14
TSPAN4-217ENST00000527644 KRTAP6-1Q3LI64 71 aa7.93□□□□□ -1.14
TSPAN4-217ENST00000527644 KRTAP5-2Q701N4 177 aa7.76□□□□□ -1.17
TSPAN4-217ENST00000527644 BRK1Q8WUW1 75 aa7.75□□□□□ -1.17
TSPAN4-217ENST00000527644 KRTAP9-4Q9BYQ2 154 aa7.73□□□□□ -1.17
TSPAN4-217ENST00000527644 KRTAP4-11Q9BYQ6 195 aa7.58□□□□□ -1.2
TSPAN4-217ENST00000527644 KRTAP6-2Q3LI66 62 aa7.56□□□□□ -1.2
TSPAN4-217ENST00000527644 MT3P25713 68 aa7.33□□□□□ -1.24
TSPAN4-217ENST00000527644 KRTAP5-8O75690 187 aa7.31□□□□□ -1.24
TSPAN4-217ENST00000527644 PMAIP1Q13794 54 aa7.3□□□□□ -1.24
TSPAN4-217ENST00000527644 OBSCNQ5VST9 7968 aa7.27□□□□□ -1.25
TSPAN4-217ENST00000527644 AHNAKQ09666 5890 aaKnown RBP7.23□□□□□ -1.25
TSPAN4-217ENST00000527644 MUC5ACP98088 5654 aa7.21□□□□□ -1.25
TSPAN4-217ENST00000527644 MUC5BQ9HC84 5762 aaPredicted RBP7.18□□□□□ -1.26
TSPAN4-217ENST00000527644 PRAC1Q96KF2 57 aa7□□□□□ -1.29
TSPAN4-217ENST00000527644 KRTAP5-1Q6L8H4 278 aa6.93□□□□□ -1.3
TSPAN4-217ENST00000527644 KRTAP9-9Q9BYP9 154 aa6.93□□□□□ -1.3
TSPAN4-217ENST00000527644 PRO0628Q9UI54 55 aa6.79□□□□□ -1.32
TSPAN4-217ENST00000527644 LCE1EQ5T753 118 aa6.71□□□□□ -1.34
TSPAN4-217ENST00000527644 KTN1-AS1Q86SY8 53 aa6.49□□□□□ -1.37
TSPAN4-217ENST00000527644 KRTAP4-2Q9BYR5 136 aa6.3□□□□□ -1.4
TSPAN4-217ENST00000527644 LCE1BQ5T7P3 118 aa6.28□□□□□ -1.4
TSPAN4-217ENST00000527644 LCE1CQ5T751 118 aa6.22□□□□□ -1.41
TSPAN4-217ENST00000527644 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
TSPAN4-217ENST00000527644 LCE3DQ9BYE3 92 aa6.12□□□□□ -1.43
TSPAN4-217ENST00000527644 LUZP6Q538Z0 58 aa5.96□□□□□ -1.46
TSPAN4-217ENST00000527644 LCE3EQ5T5B0 92 aa5.78□□□□□ -1.48
TSPAN4-217ENST00000527644 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.68□□□□□ -1.5
TSPAN4-217ENST00000527644 KRTAP4-12Q9BQ66 201 aa5.65□□□□□ -1.5
TSPAN4-217ENST00000527644 KRTAP5-11Q6L8G4 156 aa5.61□□□□□ -1.51
TSPAN4-217ENST00000527644 LCE1FQ5T754 118 aa5.46□□□□□ -1.54
TSPAN4-217ENST00000527644 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
TSPAN4-217ENST00000527644 PHGR1C9JFL3 82 aa4.95□□□□□ -1.62
TSPAN4-217ENST00000527644 NDUFAF8A1L188 74 aa4.75□□□□□ -1.65
TSPAN4-217ENST00000527644 KRTAP4-4Q9BYR3 166 aa4.75□□□□□ -1.65
TSPAN4-217ENST00000527644 MUC19Q7Z5P9 8384 aa4.47□□□□□ -1.69
TSPAN4-217ENST00000527644 PRM1P04553 51 aa4.38□□□□□ -1.71
TSPAN4-217ENST00000527644 INE1O15225 51 aa3.85□□□□□ -1.79
TSPAN4-217ENST00000527644 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
TSPAN4-217ENST00000527644 KRTAP21-1Q3LI58 79 aa3.72□□□□□ -1.81
TSPAN4-217ENST00000527644 MUC16Q8WXI7 14507 aa3.2□□□□□ -1.9
TSPAN4-217ENST00000527644 H3BS24 57 aa2.58□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms