RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 ABCA13Q86UQ4 5058 aa2.56□□□□□ -2
CTNND1-217ENST00000527599 PCLOQ9Y6V0 5065 aa2.54□□□□□ -2
CTNND1-217ENST00000527599 LRP2P98164 4655 aa2.53□□□□□ -2
CTNND1-217ENST00000527599 LPAP08519 4548 aa2.53□□□□□ -2
CTNND1-217ENST00000527599 H1FX-AS1Q4G0G2 97 aa2.46□□□□□ -2.02
CTNND1-217ENST00000527599 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
CTNND1-217ENST00000527599 S4R3F8 94 aa2.46□□□□□ -2.02
CTNND1-217ENST00000527599 HERC1Q15751 4861 aa2.45□□□□□ -2.02
CTNND1-217ENST00000527599 H0YAA0 97 aa2.41□□□□□ -2.02
CTNND1-217ENST00000527599 HMCN2Q8NDA2 5059 aa2.4□□□□□ -2.03
CTNND1-217ENST00000527599 KRTAP19-2Q3LHN2 52 aa2.38□□□□□ -2.03
CTNND1-217ENST00000527599 FLGP20930 4061 aaPredicted RBP2.37□□□□□ -2.03
CTNND1-217ENST00000527599 R4GN34 69 aa2.36□□□□□ -2.03
CTNND1-217ENST00000527599 INE1O15225 51 aa2.35□□□□□ -2.03
CTNND1-217ENST00000527599 PLAC4Q8WY50 150 aa2.35□□□□□ -2.03
CTNND1-217ENST00000527599 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
CTNND1-217ENST00000527599 A0A0D9SG42 100 aa2.3□□□□□ -2.04
CTNND1-217ENST00000527599 M0QZ58 72 aa2.3□□□□□ -2.04
CTNND1-217ENST00000527599 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
CTNND1-217ENST00000527599 RNF213Q63HN8 5207 aa2.26□□□□□ -2.05
CTNND1-217ENST00000527599 MUC2Q02817 5179 aa2.25□□□□□ -2.05
CTNND1-217ENST00000527599 UBR4Q5T4S7 5183 aa2.24□□□□□ -2.05
CTNND1-217ENST00000527599 FAT4Q6V0I7 4981 aa2.22□□□□□ -2.05
CTNND1-217ENST00000527599 MT1HP80294 61 aa2.22□□□□□ -2.05
CTNND1-217ENST00000527599 M0R2T5 61 aa2.19□□□□□ -2.06
CTNND1-217ENST00000527599 C10orf95Q9H7T3 257 aa2.18□□□□□ -2.06
CTNND1-217ENST00000527599 MT2AP02795 61 aa2.17□□□□□ -2.06
CTNND1-217ENST00000527599 SPRR2GQ9BYE4 73 aa2.16□□□□□ -2.06
CTNND1-217ENST00000527599 MT1FP04733 61 aa2.15□□□□□ -2.07
CTNND1-217ENST00000527599 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
CTNND1-217ENST00000527599 MT1BP07438 61 aa2.07□□□□□ -2.08
CTNND1-217ENST00000527599 TNP1P09430 55 aa2.05□□□□□ -2.08
CTNND1-217ENST00000527599 MT1XP80297 61 aa2.01□□□□□ -2.09
CTNND1-217ENST00000527599 USH2AO75445 5202 aa1.93□□□□□ -2.1
CTNND1-217ENST00000527599 KRTAP8-1Q8IUC2 63 aa1.92□□□□□ -2.1
CTNND1-217ENST00000527599 SSPOA2VEC9 5147 aa1.88□□□□□ -2.11
CTNND1-217ENST00000527599 KRTAP19-6Q3LI70 58 aa1.86□□□□□ -2.11
CTNND1-217ENST00000527599 KRTAP19-5Q3LI72 72 aa1.84□□□□□ -2.11
CTNND1-217ENST00000527599 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.12
CTNND1-217ENST00000527599 KMT2DO14686 5537 aa1.8□□□□□ -2.12
CTNND1-217ENST00000527599 KRTAP19-7Q3SYF9 63 aa1.79□□□□□ -2.12
CTNND1-217ENST00000527599 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
CTNND1-217ENST00000527599 MT1EP04732 61 aa1.76□□□□□ -2.13
CTNND1-217ENST00000527599 MT1LQ93083 61 aa1.73□□□□□ -2.13
CTNND1-217ENST00000527599 MACF1Q9UPN3 7388 aaKnown RBP1.69□□□□□ -2.14
CTNND1-217ENST00000527599 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
CTNND1-217ENST00000527599 KRTAP19-3Q7Z4W3 81 aa1.66□□□□□ -2.14
CTNND1-217ENST00000527599 MT1GP13640 62 aa1.65□□□□□ -2.15
CTNND1-217ENST00000527599 MT1MQ8N339 61 aa1.65□□□□□ -2.15
CTNND1-217ENST00000527599 SPRR2FQ96RM1 72 aa1.65□□□□□ -2.15
CTNND1-217ENST00000527599 MUC12Q9UKN1 5478 aa1.63□□□□□ -2.15
CTNND1-217ENST00000527599 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
CTNND1-217ENST00000527599 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
CTNND1-217ENST00000527599 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
CTNND1-217ENST00000527599 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.15
CTNND1-217ENST00000527599 SPRR2EP22531 72 aa1.56□□□□□ -2.16
CTNND1-217ENST00000527599 SPRR2BP35325 72 aa1.56□□□□□ -2.16
CTNND1-217ENST00000527599 SPRR2AP35326 72 aa1.56□□□□□ -2.16
CTNND1-217ENST00000527599 NEBP20929 6669 aa1.55□□□□□ -2.16
CTNND1-217ENST00000527599 KRTAP20-1Q3LI63 56 aa1.54□□□□□ -2.16
CTNND1-217ENST00000527599 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
CTNND1-217ENST00000527599 MDN1Q9NU22 5596 aa1.52□□□□□ -2.17
CTNND1-217ENST00000527599 SPRR2DP22532 72 aa1.51□□□□□ -2.17
CTNND1-217ENST00000527599 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
CTNND1-217ENST00000527599 MT1AP04731 61 aa1.48□□□□□ -2.17
CTNND1-217ENST00000527599 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
CTNND1-217ENST00000527599 KRTAP6-1Q3LI64 71 aa1.46□□□□□ -2.18
CTNND1-217ENST00000527599 MT4P47944 62 aa1.32□□□□□ -2.2
CTNND1-217ENST00000527599 KRTAP6-2Q3LI66 62 aa1.32□□□□□ -2.2
CTNND1-217ENST00000527599 KRTAP20-2Q3LI61 65 aa1.28□□□□□ -2.2
CTNND1-217ENST00000527599 PRM1P04553 51 aa1.27□□□□□ -2.21
CTNND1-217ENST00000527599 GPR98Q8WXG9 6306 aa1.26□□□□□ -2.21
CTNND1-217ENST00000527599 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
CTNND1-217ENST00000527599 MUC5ACP98088 5654 aa1.09□□□□□ -2.23
CTNND1-217ENST00000527599 AHNAKQ09666 5890 aaKnown RBP0.98□□□□□ -2.25
CTNND1-217ENST00000527599 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
CTNND1-217ENST00000527599 MUC5BQ9HC84 5762 aaPredicted RBP0.96□□□□□ -2.26
CTNND1-217ENST00000527599 PHGR1C9JFL3 82 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 72.9 ms