RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 PLECQ15149 4684 aaKnown RBP1.44□□□□□ -2.18
CLNS1A-209ENST00000527299 TNXBP22105 4242 aa1.44□□□□□ -2.18
CLNS1A-209ENST00000527299 STARD9Q9P2P6 4700 aa1.43□□□□□ -2.18
CLNS1A-209ENST00000527299 LRP1BQ9NZR2 4599 aa1.41□□□□□ -2.18
CLNS1A-209ENST00000527299 PKHD1P08F94 4074 aa1.4□□□□□ -2.18
CLNS1A-209ENST00000527299 UBR4Q5T4S7 5183 aa1.4□□□□□ -2.19
CLNS1A-209ENST00000527299 KIAA1109Q2LD37 5005 aa1.4□□□□□ -2.19
CLNS1A-209ENST00000527299 KRTAP8-1Q8IUC2 63 aa1.39□□□□□ -2.19
CLNS1A-209ENST00000527299 HERC1Q15751 4861 aa1.38□□□□□ -2.19
CLNS1A-209ENST00000527299 ABCA13Q86UQ4 5058 aa1.38□□□□□ -2.19
CLNS1A-209ENST00000527299 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
CLNS1A-209ENST00000527299 KRTAP2-3P0C7H8 128 aa1.35□□□□□ -2.19
CLNS1A-209ENST00000527299 KRTAP2-4Q9BYR9 128 aa1.35□□□□□ -2.19
CLNS1A-209ENST00000527299 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
CLNS1A-209ENST00000527299 FAT1Q14517 4588 aa1.35□□□□□ -2.19
CLNS1A-209ENST00000527299 SMR3BP02814 79 aaPredicted RBP1.31□□□□□ -2.2
CLNS1A-209ENST00000527299 KRTAP12-4P60329 112 aa1.31□□□□□ -2.2
CLNS1A-209ENST00000527299 KRTAP10-4P60372 401 aaPredicted RBP1.31□□□□□ -2.2
CLNS1A-209ENST00000527299 KRTAP12-3P60328 96 aa1.3□□□□□ -2.2
CLNS1A-209ENST00000527299 LPAP08519 4548 aa1.3□□□□□ -2.2
CLNS1A-209ENST00000527299 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
CLNS1A-209ENST00000527299 M0R2T5 61 aa1.29□□□□□ -2.2
CLNS1A-209ENST00000527299 KRTAP6-3Q3LI67 103 aa1.29□□□□□ -2.2
CLNS1A-209ENST00000527299 MUC17Q685J3 4493 aa1.28□□□□□ -2.21
CLNS1A-209ENST00000527299 RNF213Q63HN8 5207 aa1.28□□□□□ -2.21
CLNS1A-209ENST00000527299 HMCN2Q8NDA2 5059 aa1.27□□□□□ -2.21
CLNS1A-209ENST00000527299 SPRR2GQ9BYE4 73 aa1.22□□□□□ -2.21
CLNS1A-209ENST00000527299 LRP2P98164 4655 aa1.2□□□□□ -2.22
CLNS1A-209ENST00000527299 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
CLNS1A-209ENST00000527299 KRTAP19-2Q3LHN2 52 aa1.19□□□□□ -2.22
CLNS1A-209ENST00000527299 KRTAP19-5Q3LI72 72 aa1.19□□□□□ -2.22
CLNS1A-209ENST00000527299 MUC2Q02817 5179 aa1.18□□□□□ -2.22
CLNS1A-209ENST00000527299 FAT4Q6V0I7 4981 aa1.17□□□□□ -2.22
CLNS1A-209ENST00000527299 FSIP2Q5CZC0 6907 aa1.17□□□□□ -2.22
CLNS1A-209ENST00000527299 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
CLNS1A-209ENST00000527299 MT1XP80297 61 aa1.12□□□□□ -2.23
CLNS1A-209ENST00000527299 PRM1P04553 51 aa1.11□□□□□ -2.23
CLNS1A-209ENST00000527299 SYNE1Q8NF91 8797 aaKnown RBP1.09□□□□□ -2.24
CLNS1A-209ENST00000527299 MT1AP04731 61 aa1.07□□□□□ -2.24
CLNS1A-209ENST00000527299 MT1BP07438 61 aa1.05□□□□□ -2.24
CLNS1A-209ENST00000527299 MT1EP04732 61 aa1.04□□□□□ -2.24
CLNS1A-209ENST00000527299 MT1HP80294 61 aa1.03□□□□□ -2.24
CLNS1A-209ENST00000527299 MT1LQ93083 61 aa1.02□□□□□ -2.25
CLNS1A-209ENST00000527299 USH2AO75445 5202 aa1.02□□□□□ -2.25
CLNS1A-209ENST00000527299 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
CLNS1A-209ENST00000527299 KRTAP19-7Q3SYF9 63 aa0.99□□□□□ -2.25
CLNS1A-209ENST00000527299 MT2AP02795 61 aa0.98□□□□□ -2.25
CLNS1A-209ENST00000527299 MT1FP04733 61 aa0.98□□□□□ -2.25
CLNS1A-209ENST00000527299 SYNE2Q8WXH0 6885 aaKnown RBP0.98□□□□□ -2.25
CLNS1A-209ENST00000527299 MACF1Q9UPN3 7388 aaKnown RBP0.97□□□□□ -2.25
CLNS1A-209ENST00000527299 KRTAP20-1Q3LI63 56 aa0.97□□□□□ -2.25
CLNS1A-209ENST00000527299 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
CLNS1A-209ENST00000527299 SPRR2FQ96RM1 72 aa0.96□□□□□ -2.26
CLNS1A-209ENST00000527299 SPRR2AP35326 72 aa0.93□□□□□ -2.26
CLNS1A-209ENST00000527299 KRTAP19-6Q3LI70 58 aa0.93□□□□□ -2.26
CLNS1A-209ENST00000527299 NEBP20929 6669 aa0.92□□□□□ -2.26
CLNS1A-209ENST00000527299 SPRR2BP35325 72 aa0.92□□□□□ -2.26
CLNS1A-209ENST00000527299 KMT2DO14686 5537 aa0.91□□□□□ -2.26
CLNS1A-209ENST00000527299 MUC12Q9UKN1 5478 aa0.91□□□□□ -2.26
CLNS1A-209ENST00000527299 MT1GP13640 62 aa0.91□□□□□ -2.26
CLNS1A-209ENST00000527299 SPRR2DP22532 72 aa0.91□□□□□ -2.26
CLNS1A-209ENST00000527299 MDN1Q9NU22 5596 aa0.9□□□□□ -2.27
CLNS1A-209ENST00000527299 SPRR2EP22531 72 aa0.89□□□□□ -2.27
CLNS1A-209ENST00000527299 GPR98Q8WXG9 6306 aa0.86□□□□□ -2.27
CLNS1A-209ENST00000527299 MT1MQ8N339 61 aa0.86□□□□□ -2.27
CLNS1A-209ENST00000527299 KRTAP6-1Q3LI64 71 aa0.83□□□□□ -2.28
CLNS1A-209ENST00000527299 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
CLNS1A-209ENST00000527299 KRTAP19-3Q7Z4W3 81 aa0.82□□□□□ -2.28
CLNS1A-209ENST00000527299 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
CLNS1A-209ENST00000527299 DSTQ03001 7570 aaKnown RBP0.8□□□□□ -2.28
CLNS1A-209ENST00000527299 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
CLNS1A-209ENST00000527299 MT4P47944 62 aa0.75□□□□□ -2.29
CLNS1A-209ENST00000527299 AHNAK2Q8IVF2 5795 aa0.73□□□□□ -2.29
CLNS1A-209ENST00000527299 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
CLNS1A-209ENST00000527299 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
CLNS1A-209ENST00000527299 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
CLNS1A-209ENST00000527299 MUC5BQ9HC84 5762 aaPredicted RBP0.63□□□□□ -2.31
CLNS1A-209ENST00000527299 PHGR1C9JFL3 82 aa0.46□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 77.1 ms