RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 PSPHP1O15172 72 aa6.38□□□□□ -1.39
TRIM3-205ENST00000527237 KRTAP4-3Q9BYR4 195 aa6.34□□□□□ -1.39
TRIM3-205ENST00000527237 Q1T7F1 81 aa6.32□□□□□ -1.4
TRIM3-205ENST00000527237 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
TRIM3-205ENST00000527237 V9GYY9 64 aa6.31□□□□□ -1.4
TRIM3-205ENST00000527237 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
TRIM3-205ENST00000527237 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
TRIM3-205ENST00000527237 KRTAP25-1Q3LHN0 102 aa6.21□□□□□ -1.42
TRIM3-205ENST00000527237 K7ERS5 55 aa6.2□□□□□ -1.42
TRIM3-205ENST00000527237 LCE1DQ5T752 114 aa6.17□□□□□ -1.42
TRIM3-205ENST00000527237 A6NED7 52 aa6.13□□□□□ -1.43
TRIM3-205ENST00000527237 LCE4AQ5TA78 99 aa6.12□□□□□ -1.43
TRIM3-205ENST00000527237 MT4P47944 62 aa6.11□□□□□ -1.43
TRIM3-205ENST00000527237 KRTAP5-4Q6L8H1 288 aa6.06□□□□□ -1.44
TRIM3-205ENST00000527237 PCP4P48539 62 aa6.05□□□□□ -1.44
TRIM3-205ENST00000527237 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
TRIM3-205ENST00000527237 RPS28P62857 69 aaKnown RBP5.99□□□□□ -1.45
TRIM3-205ENST00000527237 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
TRIM3-205ENST00000527237 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
TRIM3-205ENST00000527237 CDC42SE1Q9NRR8 79 aa5.94□□□□□ -1.46
TRIM3-205ENST00000527237 KRTAP5-5Q701N2 237 aaPredicted RBP5.9□□□□□ -1.46
TRIM3-205ENST00000527237 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
TRIM3-205ENST00000527237 GPR98Q8WXG9 6306 aa5.89□□□□□ -1.47
TRIM3-205ENST00000527237 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
TRIM3-205ENST00000527237 ROMO1P60602 79 aa5.87□□□□□ -1.47
TRIM3-205ENST00000527237 AHNAK2Q8IVF2 5795 aa5.8□□□□□ -1.48
TRIM3-205ENST00000527237 LCE3CQ5T5A8 94 aa5.79□□□□□ -1.48
TRIM3-205ENST00000527237 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
TRIM3-205ENST00000527237 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
TRIM3-205ENST00000527237 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
TRIM3-205ENST00000527237 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
TRIM3-205ENST00000527237 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
TRIM3-205ENST00000527237 KRTAP12-4P60329 112 aa5.63□□□□□ -1.51
TRIM3-205ENST00000527237 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
TRIM3-205ENST00000527237 KRTAP9-6A8MVA2 160 aa5.55□□□□□ -1.52
TRIM3-205ENST00000527237 MT1AP04731 61 aa5.5□□□□□ -1.53
TRIM3-205ENST00000527237 KRTAP6-1Q3LI64 71 aa5.5□□□□□ -1.53
TRIM3-205ENST00000527237 KRTAP5-7Q6L8G8 165 aa5.41□□□□□ -1.54
TRIM3-205ENST00000527237 KRTAP5-2Q701N4 177 aa5.35□□□□□ -1.55
TRIM3-205ENST00000527237 BRK1Q8WUW1 75 aa5.35□□□□□ -1.55
TRIM3-205ENST00000527237 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
TRIM3-205ENST00000527237 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
TRIM3-205ENST00000527237 KRTAP4-11Q9BYQ6 195 aa5.18□□□□□ -1.58
TRIM3-205ENST00000527237 KRTAP5-8O75690 187 aa5.04□□□□□ -1.6
TRIM3-205ENST00000527237 PMAIP1Q13794 54 aa4.98□□□□□ -1.61
TRIM3-205ENST00000527237 MT3P25713 68 aa4.97□□□□□ -1.61
TRIM3-205ENST00000527237 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
TRIM3-205ENST00000527237 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
TRIM3-205ENST00000527237 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
TRIM3-205ENST00000527237 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
TRIM3-205ENST00000527237 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
TRIM3-205ENST00000527237 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
TRIM3-205ENST00000527237 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
TRIM3-205ENST00000527237 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
TRIM3-205ENST00000527237 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
TRIM3-205ENST00000527237 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
TRIM3-205ENST00000527237 SVIPQ8NHG7 77 aa4.36□□□□□ -1.71
TRIM3-205ENST00000527237 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
TRIM3-205ENST00000527237 LCE1BQ5T7P3 118 aa4.33□□□□□ -1.72
TRIM3-205ENST00000527237 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
TRIM3-205ENST00000527237 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
TRIM3-205ENST00000527237 LUZP6Q538Z0 58 aa3.98□□□□□ -1.77
TRIM3-205ENST00000527237 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
TRIM3-205ENST00000527237 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
TRIM3-205ENST00000527237 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
TRIM3-205ENST00000527237 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
TRIM3-205ENST00000527237 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
TRIM3-205ENST00000527237 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
TRIM3-205ENST00000527237 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
TRIM3-205ENST00000527237 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
TRIM3-205ENST00000527237 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
TRIM3-205ENST00000527237 PRM1P04553 51 aa3.05□□□□□ -1.92
TRIM3-205ENST00000527237 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
TRIM3-205ENST00000527237 H3BS24 57 aa3.01□□□□□ -1.93
TRIM3-205ENST00000527237 A0A0A0MQY5 61 aa2.73□□□□□ -1.97
TRIM3-205ENST00000527237 INE1O15225 51 aa2.55□□□□□ -2
TRIM3-205ENST00000527237 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
TRIM3-205ENST00000527237 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms