RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 APOBP04114 4563 aaKnown RBP2.37□□□□□ -2.03
C11orf54-203ENST00000526335 KRTAP4-1Q9BYQ7 146 aa2.36□□□□□ -2.03
C11orf54-203ENST00000526335 PKHD1P08F94 4074 aa2.36□□□□□ -2.03
C11orf54-203ENST00000526335 PKD1P98161 4303 aa2.35□□□□□ -2.03
C11orf54-203ENST00000526335 LRP1Q07954 4544 aaKnown RBP2.33□□□□□ -2.04
C11orf54-203ENST00000526335 FAT3Q8TDW7 4589 aa2.33□□□□□ -2.04
C11orf54-203ENST00000526335 RNF213Q63HN8 5207 aa2.32□□□□□ -2.04
C11orf54-203ENST00000526335 VPS13BQ7Z7G8 4022 aa2.32□□□□□ -2.04
C11orf54-203ENST00000526335 HMCN2Q8NDA2 5059 aa2.32□□□□□ -2.04
C11orf54-203ENST00000526335 SMR3BP02814 79 aaPredicted RBP2.32□□□□□ -2.04
C11orf54-203ENST00000526335 FAT1Q14517 4588 aa2.31□□□□□ -2.04
C11orf54-203ENST00000526335 TNXBP22105 4242 aa2.27□□□□□ -2.05
C11orf54-203ENST00000526335 KRTAP10-4P60372 401 aaPredicted RBP2.26□□□□□ -2.05
C11orf54-203ENST00000526335 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
C11orf54-203ENST00000526335 MUC2Q02817 5179 aa2.21□□□□□ -2.06
C11orf54-203ENST00000526335 FAT4Q6V0I7 4981 aa2.21□□□□□ -2.06
C11orf54-203ENST00000526335 LRP2P98164 4655 aa2.2□□□□□ -2.06
C11orf54-203ENST00000526335 MT1HL1P0DM35 61 aa2.18□□□□□ -2.06
C11orf54-203ENST00000526335 FSIP2Q5CZC0 6907 aa2.16□□□□□ -2.06
C11orf54-203ENST00000526335 TNP1P09430 55 aa2.14□□□□□ -2.07
C11orf54-203ENST00000526335 LPAP08519 4548 aa2.07□□□□□ -2.08
C11orf54-203ENST00000526335 FLGP20930 4061 aaPredicted RBP2.05□□□□□ -2.08
C11orf54-203ENST00000526335 MUC17Q685J3 4493 aa2.04□□□□□ -2.08
C11orf54-203ENST00000526335 KRTAP6-3Q3LI67 103 aa1.98□□□□□ -2.09
C11orf54-203ENST00000526335 KRTAP19-2Q3LHN2 52 aa1.97□□□□□ -2.09
C11orf54-203ENST00000526335 KRTAP8-1Q8IUC2 63 aa1.96□□□□□ -2.1
C11orf54-203ENST00000526335 KRTAP12-4P60329 112 aa1.95□□□□□ -2.1
C11orf54-203ENST00000526335 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
C11orf54-203ENST00000526335 SPRR2GQ9BYE4 73 aa1.91□□□□□ -2.1
C11orf54-203ENST00000526335 M0R2T5 61 aa1.89□□□□□ -2.11
C11orf54-203ENST00000526335 KRTAP20-1Q3LI63 56 aa1.89□□□□□ -2.11
C11orf54-203ENST00000526335 MT1HP80294 61 aa1.88□□□□□ -2.11
C11orf54-203ENST00000526335 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
C11orf54-203ENST00000526335 KRTAP12-3P60328 96 aa1.87□□□□□ -2.11
C11orf54-203ENST00000526335 USH2AO75445 5202 aa1.87□□□□□ -2.11
C11orf54-203ENST00000526335 MACF1Q9UPN3 7388 aaKnown RBP1.85□□□□□ -2.11
C11orf54-203ENST00000526335 NEBP20929 6669 aa1.81□□□□□ -2.12
C11orf54-203ENST00000526335 KRTAP19-8Q3LI54 63 aa1.8□□□□□ -2.12
C11orf54-203ENST00000526335 KRTAP2-3P0C7H8 128 aa1.78□□□□□ -2.12
C11orf54-203ENST00000526335 KRTAP2-4Q9BYR9 128 aa1.78□□□□□ -2.12
C11orf54-203ENST00000526335 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
C11orf54-203ENST00000526335 MT1XP80297 61 aa1.76□□□□□ -2.13
C11orf54-203ENST00000526335 KRTAP19-6Q3LI70 58 aa1.74□□□□□ -2.13
C11orf54-203ENST00000526335 KMT2DO14686 5537 aa1.74□□□□□ -2.13
C11orf54-203ENST00000526335 MT2AP02795 61 aa1.72□□□□□ -2.13
C11orf54-203ENST00000526335 MT1BP07438 61 aa1.72□□□□□ -2.13
C11orf54-203ENST00000526335 MT1FP04733 61 aa1.72□□□□□ -2.13
C11orf54-203ENST00000526335 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
C11orf54-203ENST00000526335 KRTAP19-5Q3LI72 72 aa1.69□□□□□ -2.14
C11orf54-203ENST00000526335 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
C11orf54-203ENST00000526335 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
C11orf54-203ENST00000526335 SPRR2EP22531 72 aa1.59□□□□□ -2.15
C11orf54-203ENST00000526335 SPRR2BP35325 72 aa1.59□□□□□ -2.15
C11orf54-203ENST00000526335 SPRR2AP35326 72 aa1.59□□□□□ -2.15
C11orf54-203ENST00000526335 KRTAP19-7Q3SYF9 63 aa1.57□□□□□ -2.16
C11orf54-203ENST00000526335 MT1LQ93083 61 aa1.56□□□□□ -2.16
C11orf54-203ENST00000526335 MT1EP04732 61 aa1.55□□□□□ -2.16
C11orf54-203ENST00000526335 SPRR2DP22532 72 aa1.55□□□□□ -2.16
C11orf54-203ENST00000526335 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
C11orf54-203ENST00000526335 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
C11orf54-203ENST00000526335 MT1AP04731 61 aa1.47□□□□□ -2.17
C11orf54-203ENST00000526335 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
C11orf54-203ENST00000526335 KRTAP5-10Q6L8G5 202 aa1.46□□□□□ -2.18
C11orf54-203ENST00000526335 MT1GP13640 62 aa1.44□□□□□ -2.18
C11orf54-203ENST00000526335 PRM1P04553 51 aa1.42□□□□□ -2.18
C11orf54-203ENST00000526335 MT1MQ8N339 61 aa1.41□□□□□ -2.18
C11orf54-203ENST00000526335 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
C11orf54-203ENST00000526335 KRTAP19-3Q7Z4W3 81 aa1.39□□□□□ -2.19
C11orf54-203ENST00000526335 MT4P47944 62 aa1.37□□□□□ -2.19
C11orf54-203ENST00000526335 KRTAP6-2Q3LI66 62 aa1.31□□□□□ -2.2
C11orf54-203ENST00000526335 KRTAP6-1Q3LI64 71 aa1.3□□□□□ -2.2
C11orf54-203ENST00000526335 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
C11orf54-203ENST00000526335 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
C11orf54-203ENST00000526335 MUC5BQ9HC84 5762 aaPredicted RBP1.23□□□□□ -2.21
C11orf54-203ENST00000526335 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
C11orf54-203ENST00000526335 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
C11orf54-203ENST00000526335 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
C11orf54-203ENST00000526335 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 33.5 ms