RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 MT1MQ8N339 61 aa6.55□□□□□ -1.36
TSPAN4-215ENST00000525334 V9GYY9 64 aa6.51□□□□□ -1.37
TSPAN4-215ENST00000525334 PSPHP1O15172 72 aa6.5□□□□□ -1.37
TSPAN4-215ENST00000525334 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
TSPAN4-215ENST00000525334 Q1T7F1 81 aa6.48□□□□□ -1.37
TSPAN4-215ENST00000525334 KRTAP12-3P60328 96 aa6.43□□□□□ -1.38
TSPAN4-215ENST00000525334 K7ERS5 55 aa6.42□□□□□ -1.38
TSPAN4-215ENST00000525334 KRTAP4-3Q9BYR4 195 aa6.41□□□□□ -1.38
TSPAN4-215ENST00000525334 KRTAP25-1Q3LHN0 102 aa6.39□□□□□ -1.39
TSPAN4-215ENST00000525334 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
TSPAN4-215ENST00000525334 LCE4AQ5TA78 99 aa6.32□□□□□ -1.4
TSPAN4-215ENST00000525334 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
TSPAN4-215ENST00000525334 A6NED7 52 aa6.28□□□□□ -1.4
TSPAN4-215ENST00000525334 MT4P47944 62 aa6.24□□□□□ -1.41
TSPAN4-215ENST00000525334 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
TSPAN4-215ENST00000525334 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
TSPAN4-215ENST00000525334 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
TSPAN4-215ENST00000525334 PCP4P48539 62 aa6.16□□□□□ -1.42
TSPAN4-215ENST00000525334 AHNAK2Q8IVF2 5795 aa6.16□□□□□ -1.42
TSPAN4-215ENST00000525334 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
TSPAN4-215ENST00000525334 KRTAP5-10Q6L8G5 202 aa6.12□□□□□ -1.43
TSPAN4-215ENST00000525334 CDC42SE1Q9NRR8 79 aa6.1□□□□□ -1.43
TSPAN4-215ENST00000525334 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
TSPAN4-215ENST00000525334 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
TSPAN4-215ENST00000525334 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
TSPAN4-215ENST00000525334 ROMO1P60602 79 aa6.02□□□□□ -1.45
TSPAN4-215ENST00000525334 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
TSPAN4-215ENST00000525334 KRTAP5-7Q6L8G8 165 aa6□□□□□ -1.45
TSPAN4-215ENST00000525334 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
TSPAN4-215ENST00000525334 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
TSPAN4-215ENST00000525334 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
TSPAN4-215ENST00000525334 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
TSPAN4-215ENST00000525334 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
TSPAN4-215ENST00000525334 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
TSPAN4-215ENST00000525334 SYNE1Q8NF91 8797 aaKnown RBP5.77□□□□□ -1.49
TSPAN4-215ENST00000525334 KRTAP9-6A8MVA2 160 aa5.61□□□□□ -1.51
TSPAN4-215ENST00000525334 MT1AP04731 61 aa5.61□□□□□ -1.51
TSPAN4-215ENST00000525334 KRTAP6-1Q3LI64 71 aa5.58□□□□□ -1.52
TSPAN4-215ENST00000525334 BRK1Q8WUW1 75 aa5.46□□□□□ -1.54
TSPAN4-215ENST00000525334 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
TSPAN4-215ENST00000525334 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
TSPAN4-215ENST00000525334 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
TSPAN4-215ENST00000525334 AHNAKQ09666 5890 aaKnown RBP5.32□□□□□ -1.56
TSPAN4-215ENST00000525334 KRTAP6-2Q3LI66 62 aa5.31□□□□□ -1.56
TSPAN4-215ENST00000525334 MUC5ACP98088 5654 aa5.24□□□□□ -1.57
TSPAN4-215ENST00000525334 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
TSPAN4-215ENST00000525334 MUC5BQ9HC84 5762 aaPredicted RBP5.14□□□□□ -1.59
TSPAN4-215ENST00000525334 MT3P25713 68 aa5.12□□□□□ -1.59
TSPAN4-215ENST00000525334 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
TSPAN4-215ENST00000525334 OBSCNQ5VST9 7968 aa5.07□□□□□ -1.6
TSPAN4-215ENST00000525334 PRAC1Q96KF2 57 aa4.95□□□□□ -1.62
TSPAN4-215ENST00000525334 KRTAP9-9Q9BYP9 154 aa4.94□□□□□ -1.62
TSPAN4-215ENST00000525334 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
TSPAN4-215ENST00000525334 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
TSPAN4-215ENST00000525334 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
TSPAN4-215ENST00000525334 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
TSPAN4-215ENST00000525334 KRTAP4-2Q9BYR5 136 aa4.43□□□□□ -1.7
TSPAN4-215ENST00000525334 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
TSPAN4-215ENST00000525334 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
TSPAN4-215ENST00000525334 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
TSPAN4-215ENST00000525334 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
TSPAN4-215ENST00000525334 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
TSPAN4-215ENST00000525334 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
TSPAN4-215ENST00000525334 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
TSPAN4-215ENST00000525334 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.97□□□□□ -1.77
TSPAN4-215ENST00000525334 KRTAP5-11Q6L8G4 156 aa3.93□□□□□ -1.78
TSPAN4-215ENST00000525334 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
TSPAN4-215ENST00000525334 KRTAP21-2Q3LI59 83 aa3.67□□□□□ -1.82
TSPAN4-215ENST00000525334 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
TSPAN4-215ENST00000525334 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
TSPAN4-215ENST00000525334 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
TSPAN4-215ENST00000525334 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
TSPAN4-215ENST00000525334 PRM1P04553 51 aa3.09□□□□□ -1.91
TSPAN4-215ENST00000525334 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
TSPAN4-215ENST00000525334 INE1O15225 51 aa2.67□□□□□ -1.98
TSPAN4-215ENST00000525334 A0A0A0MQY5 61 aa2.6□□□□□ -1.99
TSPAN4-215ENST00000525334 H3BS24 57 aa2.56□□□□□ -2
TSPAN4-215ENST00000525334 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 92.7 ms