RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
CD44-213ENST00000525209 MUC2Q02817 5179 aa1.55□□□□□ -2.16
CD44-213ENST00000525209 RPL39LQ96EH5 51 aaKnown RBP1.55□□□□□ -2.16
CD44-213ENST00000525209 C9orf92A6NGG3 77 aa1.53□□□□□ -2.16
CD44-213ENST00000525209 M0QY20 66 aa1.53□□□□□ -2.16
CD44-213ENST00000525209 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
CD44-213ENST00000525209 TNXBP22105 4242 aa1.53□□□□□ -2.16
CD44-213ENST00000525209 PRLHP81277 87 aa1.53□□□□□ -2.16
CD44-213ENST00000525209 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
CD44-213ENST00000525209 SYNE2Q8WXH0 6885 aaKnown RBP1.5□□□□□ -2.17
CD44-213ENST00000525209 FAT4Q6V0I7 4981 aa1.5□□□□□ -2.17
CD44-213ENST00000525209 RPL39P62891 51 aaKnown RBP1.49□□□□□ -2.17
CD44-213ENST00000525209 HMCN1Q96RW7 5635 aa1.48□□□□□ -2.17
CD44-213ENST00000525209 SPINK1P00995 79 aa1.47□□□□□ -2.17
CD44-213ENST00000525209 KRTAP4-1Q9BYQ7 146 aa1.47□□□□□ -2.17
CD44-213ENST00000525209 MT1HP80294 61 aa1.46□□□□□ -2.18
CD44-213ENST00000525209 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
CD44-213ENST00000525209 POLR2KP53803 58 aaKnown RBP1.44□□□□□ -2.18
CD44-213ENST00000525209 IGLV5-48A0A075B6I7 105 aa1.4□□□□□ -2.19
CD44-213ENST00000525209 KRTAP20-1Q3LI63 56 aa1.38□□□□□ -2.19
CD44-213ENST00000525209 S4R3F8 94 aa1.38□□□□□ -2.19
CD44-213ENST00000525209 RPS29P62273 56 aaKnown RBP1.36□□□□□ -2.19
CD44-213ENST00000525209 USH2AO75445 5202 aa1.36□□□□□ -2.19
CD44-213ENST00000525209 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
CD44-213ENST00000525209 MMP24-AS1A0A0U1RRL7 71 aa1.35□□□□□ -2.19
CD44-213ENST00000525209 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
CD44-213ENST00000525209 NEBP20929 6669 aa1.34□□□□□ -2.19
CD44-213ENST00000525209 KRTAP19-2Q3LHN2 52 aa1.34□□□□□ -2.19
CD44-213ENST00000525209 KRTAP5-7Q6L8G8 165 aa1.33□□□□□ -2.2
CD44-213ENST00000525209 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
CD44-213ENST00000525209 MT2AP02795 61 aa1.32□□□□□ -2.2
CD44-213ENST00000525209 MT1FP04733 61 aa1.32□□□□□ -2.2
CD44-213ENST00000525209 MUC19Q7Z5P9 8384 aa1.29□□□□□ -2.2
CD44-213ENST00000525209 KRTAP2-3P0C7H8 128 aa1.28□□□□□ -2.2
CD44-213ENST00000525209 SPRR2EP22531 72 aa1.28□□□□□ -2.2
CD44-213ENST00000525209 SPRR2BP35325 72 aa1.28□□□□□ -2.2
CD44-213ENST00000525209 SPRR2AP35326 72 aa1.28□□□□□ -2.2
CD44-213ENST00000525209 KRTAP2-4Q9BYR9 128 aa1.28□□□□□ -2.2
CD44-213ENST00000525209 KRTAP19-6Q3LI70 58 aa1.27□□□□□ -2.21
CD44-213ENST00000525209 FLGP20930 4061 aaPredicted RBP1.26□□□□□ -2.21
CD44-213ENST00000525209 SPRR2FQ96RM1 72 aa1.26□□□□□ -2.21
CD44-213ENST00000525209 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
CD44-213ENST00000525209 SPRR2DP22532 72 aa1.24□□□□□ -2.21
CD44-213ENST00000525209 KRTAP2-1Q9BYU5 128 aa1.22□□□□□ -2.21
CD44-213ENST00000525209 DSTQ03001 7570 aaKnown RBP1.22□□□□□ -2.21
CD44-213ENST00000525209 KMT2DO14686 5537 aa1.21□□□□□ -2.22
CD44-213ENST00000525209 KRTAP8-1Q8IUC2 63 aa1.21□□□□□ -2.22
CD44-213ENST00000525209 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
CD44-213ENST00000525209 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
CD44-213ENST00000525209 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
CD44-213ENST00000525209 MT1BP07438 61 aa1.13□□□□□ -2.23
CD44-213ENST00000525209 MT4P47944 62 aa1.13□□□□□ -2.23
CD44-213ENST00000525209 KRTAP19-3Q7Z4W3 81 aa1.11□□□□□ -2.23
CD44-213ENST00000525209 M0QZ58 72 aa1.1□□□□□ -2.23
CD44-213ENST00000525209 KRTAP19-8Q3LI54 63 aa1.09□□□□□ -2.23
CD44-213ENST00000525209 SPRR2GQ9BYE4 73 aa1.09□□□□□ -2.23
CD44-213ENST00000525209 MT1XP80297 61 aa1.04□□□□□ -2.24
CD44-213ENST00000525209 PRM1P04553 51 aa1.03□□□□□ -2.24
CD44-213ENST00000525209 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
CD44-213ENST00000525209 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
CD44-213ENST00000525209 TNP1P09430 55 aa0.96□□□□□ -2.26
CD44-213ENST00000525209 MT1GP13640 62 aa0.94□□□□□ -2.26
CD44-213ENST00000525209 KRTAP19-5Q3LI72 72 aa0.94□□□□□ -2.26
CD44-213ENST00000525209 MT1EP04732 61 aa0.93□□□□□ -2.26
CD44-213ENST00000525209 MT1MQ8N339 61 aa0.92□□□□□ -2.26
CD44-213ENST00000525209 KRTAP20-2Q3LI61 65 aa0.9□□□□□ -2.27
CD44-213ENST00000525209 KRTAP19-7Q3SYF9 63 aa0.9□□□□□ -2.27
CD44-213ENST00000525209 AHNAKQ09666 5890 aaKnown RBP0.9□□□□□ -2.27
CD44-213ENST00000525209 MT1LQ93083 61 aa0.88□□□□□ -2.27
CD44-213ENST00000525209 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
CD44-213ENST00000525209 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CD44-213ENST00000525209 MUC5BQ9HC84 5762 aaPredicted RBP0.85□□□□□ -2.27
CD44-213ENST00000525209 MUC5ACP98088 5654 aa0.81□□□□□ -2.28
CD44-213ENST00000525209 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
CD44-213ENST00000525209 KRTAP6-1Q3LI64 71 aa0.77□□□□□ -2.29
CD44-213ENST00000525209 MT1AP04731 61 aa0.74□□□□□ -2.29
CD44-213ENST00000525209 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
CD44-213ENST00000525209 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 35.3 ms