RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 MT1LQ93083 61 aa7.45□□□□□ -1.22
TRAPPC9-215ENST00000524162 K7ERS5 55 aa7.43□□□□□ -1.22
TRAPPC9-215ENST00000524162 PSPHP1O15172 72 aa7.42□□□□□ -1.22
TRAPPC9-215ENST00000524162 MT1MQ8N339 61 aa7.39□□□□□ -1.23
TRAPPC9-215ENST00000524162 KRTAP25-1Q3LHN0 102 aa7.37□□□□□ -1.23
TRAPPC9-215ENST00000524162 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
TRAPPC9-215ENST00000524162 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
TRAPPC9-215ENST00000524162 A6NED7 52 aa7.21□□□□□ -1.26
TRAPPC9-215ENST00000524162 KRTAP23-1A1A580 65 aa7.19□□□□□ -1.26
TRAPPC9-215ENST00000524162 PCP4P48539 62 aa7.19□□□□□ -1.26
TRAPPC9-215ENST00000524162 LCE4AQ5TA78 99 aa7.12□□□□□ -1.27
TRAPPC9-215ENST00000524162 KRTAP19-4Q3LI73 84 aa7.11□□□□□ -1.27
TRAPPC9-215ENST00000524162 KRTAP4-3Q9BYR4 195 aa7.1□□□□□ -1.27
TRAPPC9-215ENST00000524162 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
TRAPPC9-215ENST00000524162 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
TRAPPC9-215ENST00000524162 KRTAP5-4Q6L8H1 288 aa7.02□□□□□ -1.29
TRAPPC9-215ENST00000524162 LCE1DQ5T752 114 aa7□□□□□ -1.29
TRAPPC9-215ENST00000524162 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
TRAPPC9-215ENST00000524162 HMCN1Q96RW7 5635 aa6.95□□□□□ -1.3
TRAPPC9-215ENST00000524162 ROMO1P60602 79 aa6.92□□□□□ -1.3
TRAPPC9-215ENST00000524162 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
TRAPPC9-215ENST00000524162 GPR98Q8WXG9 6306 aa6.88□□□□□ -1.31
TRAPPC9-215ENST00000524162 MT4P47944 62 aa6.88□□□□□ -1.31
TRAPPC9-215ENST00000524162 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC9-215ENST00000524162 LCE3CQ5T5A8 94 aa6.75□□□□□ -1.33
TRAPPC9-215ENST00000524162 KRTAP4-6Q9BYQ5 205 aa6.74□□□□□ -1.33
TRAPPC9-215ENST00000524162 AHNAK2Q8IVF2 5795 aa6.63□□□□□ -1.35
TRAPPC9-215ENST00000524162 SPRR5A0A1B0GTR4 108 aa6.63□□□□□ -1.35
TRAPPC9-215ENST00000524162 LOC100996750A0A140TA64 210 aa6.62□□□□□ -1.35
TRAPPC9-215ENST00000524162 KRTAP12-4P60329 112 aa6.58□□□□□ -1.36
TRAPPC9-215ENST00000524162 KRTAP20-2Q3LI61 65 aa6.56□□□□□ -1.36
TRAPPC9-215ENST00000524162 SVIPQ8NHG7 77 aa6.56□□□□□ -1.36
TRAPPC9-215ENST00000524162 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
TRAPPC9-215ENST00000524162 KRTAP5-10Q6L8G5 202 aa6.47□□□□□ -1.37
TRAPPC9-215ENST00000524162 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
TRAPPC9-215ENST00000524162 MT1AP04731 61 aa6.37□□□□□ -1.39
TRAPPC9-215ENST00000524162 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
TRAPPC9-215ENST00000524162 BRK1Q8WUW1 75 aa6.29□□□□□ -1.4
TRAPPC9-215ENST00000524162 KRTAP6-1Q3LI64 71 aa6.26□□□□□ -1.41
TRAPPC9-215ENST00000524162 KRTAP5-7Q6L8G8 165 aa6.23□□□□□ -1.41
TRAPPC9-215ENST00000524162 KRTAP5-2Q701N4 177 aa6.18□□□□□ -1.42
TRAPPC9-215ENST00000524162 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
TRAPPC9-215ENST00000524162 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
TRAPPC9-215ENST00000524162 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
TRAPPC9-215ENST00000524162 KRTAP6-2Q3LI66 62 aa5.96□□□□□ -1.46
TRAPPC9-215ENST00000524162 MT3P25713 68 aa5.83□□□□□ -1.48
TRAPPC9-215ENST00000524162 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
TRAPPC9-215ENST00000524162 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
TRAPPC9-215ENST00000524162 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
TRAPPC9-215ENST00000524162 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
TRAPPC9-215ENST00000524162 KRTAP5-1Q6L8H4 278 aa5.49□□□□□ -1.53
TRAPPC9-215ENST00000524162 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
TRAPPC9-215ENST00000524162 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
TRAPPC9-215ENST00000524162 MUC5ACP98088 5654 aa5.42□□□□□ -1.54
TRAPPC9-215ENST00000524162 AHNAKQ09666 5890 aaKnown RBP5.42□□□□□ -1.54
TRAPPC9-215ENST00000524162 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
TRAPPC9-215ENST00000524162 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
TRAPPC9-215ENST00000524162 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
TRAPPC9-215ENST00000524162 LCE1CQ5T751 118 aa4.98□□□□□ -1.61
TRAPPC9-215ENST00000524162 LCE1BQ5T7P3 118 aa4.98□□□□□ -1.61
TRAPPC9-215ENST00000524162 LCE3DQ9BYE3 92 aa4.9□□□□□ -1.63
TRAPPC9-215ENST00000524162 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
TRAPPC9-215ENST00000524162 LCE3EQ5T5B0 92 aa4.63□□□□□ -1.67
TRAPPC9-215ENST00000524162 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC9-215ENST00000524162 H3BS24 57 aa4.57□□□□□ -1.68
TRAPPC9-215ENST00000524162 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
TRAPPC9-215ENST00000524162 LCE1FQ5T754 118 aa4.39□□□□□ -1.71
TRAPPC9-215ENST00000524162 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
TRAPPC9-215ENST00000524162 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
TRAPPC9-215ENST00000524162 A0A0A0MQY5 61 aa4.06□□□□□ -1.76
TRAPPC9-215ENST00000524162 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
TRAPPC9-215ENST00000524162 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
TRAPPC9-215ENST00000524162 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
TRAPPC9-215ENST00000524162 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
TRAPPC9-215ENST00000524162 PRM1P04553 51 aa3.49□□□□□ -1.85
TRAPPC9-215ENST00000524162 INE1O15225 51 aa3.29□□□□□ -1.88
TRAPPC9-215ENST00000524162 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
TRAPPC9-215ENST00000524162 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms