RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 C10orf95Q9H7T3 257 aa5.86□□□□□ -1.47
SPIDR-221ENST00000523814 TNP1P09430 55 aa5.84□□□□□ -1.47
SPIDR-221ENST00000523814 KRTAP4-3Q9BYR4 195 aa5.84□□□□□ -1.47
SPIDR-221ENST00000523814 KRTAP5-4Q6L8H1 288 aa5.83□□□□□ -1.48
SPIDR-221ENST00000523814 HMCN1Q96RW7 5635 aa5.82□□□□□ -1.48
SPIDR-221ENST00000523814 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
SPIDR-221ENST00000523814 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
SPIDR-221ENST00000523814 KRTAP5-10Q6L8G5 202 aa5.67□□□□□ -1.5
SPIDR-221ENST00000523814 PRR15LQ9BU68 103 aa5.66□□□□□ -1.5
SPIDR-221ENST00000523814 KRTAP4-7Q9BYR0 210 aa5.66□□□□□ -1.5
SPIDR-221ENST00000523814 AHNAK2Q8IVF2 5795 aa5.65□□□□□ -1.5
SPIDR-221ENST00000523814 KRTAP12-3P60328 96 aa5.65□□□□□ -1.5
SPIDR-221ENST00000523814 ANAPC13Q9BS18 74 aa5.63□□□□□ -1.51
SPIDR-221ENST00000523814 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
SPIDR-221ENST00000523814 CCDC179H3BU77 68 aa5.54□□□□□ -1.52
SPIDR-221ENST00000523814 ATP5EP56381 51 aaPredicted RBP5.54□□□□□ -1.52
SPIDR-221ENST00000523814 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
SPIDR-221ENST00000523814 KRTAP5-3Q6L8H2 238 aa5.5□□□□□ -1.53
SPIDR-221ENST00000523814 KRTAP20-2Q3LI61 65 aa5.49□□□□□ -1.53
SPIDR-221ENST00000523814 KRTAP5-7Q6L8G8 165 aa5.49□□□□□ -1.53
SPIDR-221ENST00000523814 SPRR5A0A1B0GTR4 108 aa5.48□□□□□ -1.53
SPIDR-221ENST00000523814 UQCR11O14957 56 aa5.47□□□□□ -1.53
SPIDR-221ENST00000523814 KRTAP25-1Q3LHN0 102 aa5.43□□□□□ -1.54
SPIDR-221ENST00000523814 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
SPIDR-221ENST00000523814 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
SPIDR-221ENST00000523814 TMEM258P61165 79 aa5.32□□□□□ -1.56
SPIDR-221ENST00000523814 MIR22HGQ0VDD5 57 aa5.32□□□□□ -1.56
SPIDR-221ENST00000523814 PCP4P48539 62 aa5.28□□□□□ -1.56
SPIDR-221ENST00000523814 K7ERS5 55 aa5.25□□□□□ -1.57
SPIDR-221ENST00000523814 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
SPIDR-221ENST00000523814 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
SPIDR-221ENST00000523814 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
SPIDR-221ENST00000523814 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
SPIDR-221ENST00000523814 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
SPIDR-221ENST00000523814 PSPHP1O15172 72 aa5.1□□□□□ -1.59
SPIDR-221ENST00000523814 V9GYY9 64 aa5.1□□□□□ -1.59
SPIDR-221ENST00000523814 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
SPIDR-221ENST00000523814 KRTAP5-2Q701N4 177 aa5.08□□□□□ -1.6
SPIDR-221ENST00000523814 MT1AP04731 61 aa5.07□□□□□ -1.6
SPIDR-221ENST00000523814 Q1T7F1 81 aa5.07□□□□□ -1.6
SPIDR-221ENST00000523814 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
SPIDR-221ENST00000523814 A0A0A0MQY5 61 aa4.96□□□□□ -1.62
SPIDR-221ENST00000523814 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
SPIDR-221ENST00000523814 A6NED7 52 aa4.91□□□□□ -1.62
SPIDR-221ENST00000523814 KRTAP9-6A8MVA2 160 aa4.91□□□□□ -1.62
SPIDR-221ENST00000523814 KRTAP5-8O75690 187 aa4.91□□□□□ -1.62
SPIDR-221ENST00000523814 RPS28P62857 69 aaKnown RBP4.89□□□□□ -1.63
SPIDR-221ENST00000523814 ROMO1P60602 79 aa4.87□□□□□ -1.63
SPIDR-221ENST00000523814 KRTAP6-2Q3LI66 62 aa4.87□□□□□ -1.63
SPIDR-221ENST00000523814 MUC5ACP98088 5654 aa4.73□□□□□ -1.65
SPIDR-221ENST00000523814 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
SPIDR-221ENST00000523814 OBSCNQ5VST9 7968 aa4.68□□□□□ -1.66
SPIDR-221ENST00000523814 MT3P25713 68 aa4.65□□□□□ -1.67
SPIDR-221ENST00000523814 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.67
SPIDR-221ENST00000523814 KRTAP5-1Q6L8H4 278 aa4.58□□□□□ -1.68
SPIDR-221ENST00000523814 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
SPIDR-221ENST00000523814 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
SPIDR-221ENST00000523814 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
SPIDR-221ENST00000523814 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
SPIDR-221ENST00000523814 BRK1Q8WUW1 75 aa3.94□□□□□ -1.78
SPIDR-221ENST00000523814 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
SPIDR-221ENST00000523814 PMAIP1Q13794 54 aa3.71□□□□□ -1.82
SPIDR-221ENST00000523814 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
SPIDR-221ENST00000523814 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.83
SPIDR-221ENST00000523814 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
SPIDR-221ENST00000523814 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
SPIDR-221ENST00000523814 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
SPIDR-221ENST00000523814 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
SPIDR-221ENST00000523814 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
SPIDR-221ENST00000523814 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
SPIDR-221ENST00000523814 KTN1-AS1Q86SY8 53 aa3.12□□□□□ -1.91
SPIDR-221ENST00000523814 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
SPIDR-221ENST00000523814 KRTAP4-4Q9BYR3 166 aa3.06□□□□□ -1.92
SPIDR-221ENST00000523814 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
SPIDR-221ENST00000523814 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SPIDR-221ENST00000523814 PRM1P04553 51 aa2.46□□□□□ -2.02
SPIDR-221ENST00000523814 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
SPIDR-221ENST00000523814 INE1O15225 51 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 6 ms