RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	TRAV7	A0A075B6U4	112 aa		2.55	□□□□□ -2
EIF3E-216	ENST00000522887	SMIM20	Q8N5G0	67 aa		2.55	□□□□□ -2
EIF3E-216	ENST00000522887		K7ERU9	68 aa		2.54	□□□□□ -2
EIF3E-216	ENST00000522887	KRTAP8-1	Q8IUC2	63 aa		2.54	□□□□□ -2
EIF3E-216	ENST00000522887	SPRR2F	Q96RM1	72 aa		2.54	□□□□□ -2
EIF3E-216	ENST00000522887	SNURF	Q9Y675	71 aa		2.54	□□□□□ -2
EIF3E-216	ENST00000522887	SPRR2E	P22531	72 aa		2.52	□□□□□ -2.01
EIF3E-216	ENST00000522887	SPRR2B	P35325	72 aa		2.52	□□□□□ -2.01
EIF3E-216	ENST00000522887	SPRR2A	P35326	72 aa		2.52	□□□□□ -2.01
EIF3E-216	ENST00000522887	MT1X	P80297	61 aa		2.5	□□□□□ -2.01
EIF3E-216	ENST00000522887	KRTAP5-7	Q6L8G8	165 aa		2.5	□□□□□ -2.01
EIF3E-216	ENST00000522887		A6NED7	52 aa		2.49	□□□□□ -2.01
EIF3E-216	ENST00000522887	SERP1	Q9Y6X1	66 aa		2.47	□□□□□ -2.01
EIF3E-216	ENST00000522887	KRTAP2-3	P0C7H8	128 aa		2.46	□□□□□ -2.02
EIF3E-216	ENST00000522887	KRTAP2-4	Q9BYR9	128 aa		2.46	□□□□□ -2.02
EIF3E-216	ENST00000522887	NEB	P20929	6669 aa		2.46	□□□□□ -2.02
EIF3E-216	ENST00000522887		A0A0D9SG42	100 aa		2.44	□□□□□ -2.02
EIF3E-216	ENST00000522887	SPRR2D	P22532	72 aa		2.44	□□□□□ -2.02
EIF3E-216	ENST00000522887	KRTAP25-1	Q3LHN0	102 aa		2.44	□□□□□ -2.02
EIF3E-216	ENST00000522887	SERP2	Q8N6R1	65 aa		2.44	□□□□□ -2.02
EIF3E-216	ENST00000522887		A0A1B0GU33	70 aa		2.41	□□□□□ -2.02
EIF3E-216	ENST00000522887	COA5	Q86WW8	74 aa		2.41	□□□□□ -2.02
EIF3E-216	ENST00000522887	MUC12	Q9UKN1	5478 aa		2.4	□□□□□ -2.03
EIF3E-216	ENST00000522887	KMT2D	O14686	5537 aa		2.39	□□□□□ -2.03
EIF3E-216	ENST00000522887	SPATA8	Q6RVD6	105 aa		2.38	□□□□□ -2.03
EIF3E-216	ENST00000522887	KRTAP2-1	Q9BYU5	128 aa		2.38	□□□□□ -2.03
EIF3E-216	ENST00000522887	KRTAP13-4	Q3LI77	160 aa		2.37	□□□□□ -2.03
EIF3E-216	ENST00000522887	MDN1	Q9NU22	5596 aa		2.36	□□□□□ -2.03
EIF3E-216	ENST00000522887	COX7C	P15954	63 aa		2.36	□□□□□ -2.03
EIF3E-216	ENST00000522887		A0A1B0GU69	56 aa		2.34	□□□□□ -2.03
EIF3E-216	ENST00000522887	PMAIP1	Q13794	54 aa		2.33	□□□□□ -2.04
EIF3E-216	ENST00000522887		H7BZZ5	65 aa		2.29	□□□□□ -2.04
EIF3E-216	ENST00000522887	PRR15L	Q9BU68	103 aa		2.29	□□□□□ -2.04
EIF3E-216	ENST00000522887	CYSTM1	Q9H1C7	97 aa		2.27	□□□□□ -2.05
EIF3E-216	ENST00000522887	KRTAP12-1	P59990	96 aa		2.26	□□□□□ -2.05
EIF3E-216	ENST00000522887	KRTAP21-2	Q3LI59	83 aa		2.25	□□□□□ -2.05
EIF3E-216	ENST00000522887	KRTAP19-5	Q3LI72	72 aa		2.24	□□□□□ -2.05
EIF3E-216	ENST00000522887	CCDC179	H3BU77	68 aa		2.23	□□□□□ -2.05
EIF3E-216	ENST00000522887	MT1E	P04732	61 aa		2.23	□□□□□ -2.05
EIF3E-216	ENST00000522887	TNP1	P09430	55 aa		2.23	□□□□□ -2.05
EIF3E-216	ENST00000522887	KRTAP19-3	Q7Z4W3	81 aa		2.23	□□□□□ -2.05
EIF3E-216	ENST00000522887	KRTAP19-7	Q3SYF9	63 aa		2.21	□□□□□ -2.06
EIF3E-216	ENST00000522887	ATP5E	P56381	51 aa	Predicted RBP	2.2	□□□□□ -2.06
EIF3E-216	ENST00000522887	MT1G	P13640	62 aa		2.18	□□□□□ -2.06
EIF3E-216	ENST00000522887	C10orf95	Q9H7T3	257 aa		2.18	□□□□□ -2.06
EIF3E-216	ENST00000522887	UQCR11	O14957	56 aa		2.17	□□□□□ -2.06
EIF3E-216	ENST00000522887	KRTAP12-4	P60329	112 aa		2.17	□□□□□ -2.06
EIF3E-216	ENST00000522887	MT4	P47944	62 aa		2.16	□□□□□ -2.06
EIF3E-216	ENST00000522887	LINC01558	Q9Y6Z2	57 aa		2.16	□□□□□ -2.06
EIF3E-216	ENST00000522887	KRTAP12-3	P60328	96 aa		2.14	□□□□□ -2.07
EIF3E-216	ENST00000522887	TMEM258	P61165	79 aa		2.13	□□□□□ -2.07
EIF3E-216	ENST00000522887	MIR22HG	Q0VDD5	57 aa		2.13	□□□□□ -2.07
EIF3E-216	ENST00000522887	MT1M	Q8N339	61 aa		2.13	□□□□□ -2.07
EIF3E-216	ENST00000522887	MT1L	Q93083	61 aa		2.13	□□□□□ -2.07
EIF3E-216	ENST00000522887	DST	Q03001	7570 aa	Known RBP	2.09	□□□□□ -2.07
EIF3E-216	ENST00000522887	KTN1-AS1	Q86SY8	53 aa		2.04	□□□□□ -2.08
EIF3E-216	ENST00000522887	GPR98	Q8WXG9	6306 aa		2.02	□□□□□ -2.09
EIF3E-216	ENST00000522887	CDC42SE1	Q9NRR8	79 aa		2	□□□□□ -2.09
EIF3E-216	ENST00000522887		Q1T7F1	81 aa		1.99	□□□□□ -2.09
EIF3E-216	ENST00000522887	RPS28	P62857	69 aa	Known RBP	1.97	□□□□□ -2.09
EIF3E-216	ENST00000522887	HMCN1	Q96RW7	5635 aa		1.95	□□□□□ -2.1
EIF3E-216	ENST00000522887	ROMO1	P60602	79 aa		1.94	□□□□□ -2.1
EIF3E-216	ENST00000522887	KRTAP20-2	Q3LI61	65 aa		1.92	□□□□□ -2.1
EIF3E-216	ENST00000522887	KRTAP5-10	Q6L8G5	202 aa		1.91	□□□□□ -2.1
EIF3E-216	ENST00000522887	AHNAK2	Q8IVF2	5795 aa		1.85	□□□□□ -2.11
EIF3E-216	ENST00000522887	MT1A	P04731	61 aa		1.81	□□□□□ -2.12
EIF3E-216	ENST00000522887	KRTAP6-1	Q3LI64	71 aa		1.81	□□□□□ -2.12
EIF3E-216	ENST00000522887	KRTAP6-2	Q3LI66	62 aa		1.76	□□□□□ -2.13
EIF3E-216	ENST00000522887	SYNE1	Q8NF91	8797 aa	Known RBP	1.75	□□□□□ -2.13
EIF3E-216	ENST00000522887	BRK1	Q8WUW1	75 aa		1.74	□□□□□ -2.13
EIF3E-216	ENST00000522887	INE1	O15225	51 aa		1.62	□□□□□ -2.15
EIF3E-216	ENST00000522887	MUC5AC	P98088	5654 aa		1.54	□□□□□ -2.16
EIF3E-216	ENST00000522887	AHNAK	Q09666	5890 aa	Known RBP	1.53	□□□□□ -2.16
EIF3E-216	ENST00000522887	MUC5B	Q9HC84	5762 aa	Predicted RBP	1.51	□□□□□ -2.17
EIF3E-216	ENST00000522887	PHGR1	C9JFL3	82 aa		1.2	□□□□□ -2.22
EIF3E-216	ENST00000522887	MUC16	Q8WXI7	14507 aa		1.01	□□□□□ -2.25
EIF3E-216	ENST00000522887	PRM1	P04553	51 aa		0.99	□□□□□ -2.25
EIF3E-216	ENST00000522887	KRTAP21-1	Q3LI58	79 aa		0.89	□□□□□ -2.27

Retrieved 78 of 20,778 RNA–protein pairs in 69.2 ms