RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 KRTAP4-3Q9BYR4 195 aa6.39□□□□□ -1.39
TOP1MT-216ENST00000522121 HMCN1Q96RW7 5635 aa6.39□□□□□ -1.39
TOP1MT-216ENST00000522121 CCDC179H3BU77 68 aa6.36□□□□□ -1.39
TOP1MT-216ENST00000522121 LINC01558Q9Y6Z2 57 aa6.33□□□□□ -1.4
TOP1MT-216ENST00000522121 KRTAP5-4Q6L8H1 288 aa6.32□□□□□ -1.4
TOP1MT-216ENST00000522121 KRTAP12-3P60328 96 aa6.28□□□□□ -1.4
TOP1MT-216ENST00000522121 LOC100996750A0A140TA64 210 aa6.27□□□□□ -1.41
TOP1MT-216ENST00000522121 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
TOP1MT-216ENST00000522121 UQCR11O14957 56 aa6.24□□□□□ -1.41
TOP1MT-216ENST00000522121 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
TOP1MT-216ENST00000522121 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
TOP1MT-216ENST00000522121 TMEM258P61165 79 aa6.14□□□□□ -1.43
TOP1MT-216ENST00000522121 KRTAP5-10Q6L8G5 202 aa6.11□□□□□ -1.43
TOP1MT-216ENST00000522121 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
TOP1MT-216ENST00000522121 MIR22HGQ0VDD5 57 aa6.08□□□□□ -1.44
TOP1MT-216ENST00000522121 K7ERS5 55 aa6.04□□□□□ -1.44
TOP1MT-216ENST00000522121 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
TOP1MT-216ENST00000522121 KRTAP20-2Q3LI61 65 aa5.99□□□□□ -1.45
TOP1MT-216ENST00000522121 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
TOP1MT-216ENST00000522121 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
TOP1MT-216ENST00000522121 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
TOP1MT-216ENST00000522121 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
TOP1MT-216ENST00000522121 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
TOP1MT-216ENST00000522121 V9GYY9 64 aa5.89□□□□□ -1.47
TOP1MT-216ENST00000522121 PSPHP1O15172 72 aa5.87□□□□□ -1.47
TOP1MT-216ENST00000522121 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
TOP1MT-216ENST00000522121 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
TOP1MT-216ENST00000522121 Q1T7F1 81 aa5.8□□□□□ -1.48
TOP1MT-216ENST00000522121 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
TOP1MT-216ENST00000522121 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
TOP1MT-216ENST00000522121 A6NED7 52 aa5.67□□□□□ -1.5
TOP1MT-216ENST00000522121 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
TOP1MT-216ENST00000522121 MT1AP04731 61 aa5.58□□□□□ -1.52
TOP1MT-216ENST00000522121 RPS28P62857 69 aaKnown RBP5.57□□□□□ -1.52
TOP1MT-216ENST00000522121 ROMO1P60602 79 aa5.55□□□□□ -1.52
TOP1MT-216ENST00000522121 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
TOP1MT-216ENST00000522121 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
TOP1MT-216ENST00000522121 H3BS24 57 aa5.52□□□□□ -1.53
TOP1MT-216ENST00000522121 KRTAP5-2Q701N4 177 aa5.51□□□□□ -1.53
TOP1MT-216ENST00000522121 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
TOP1MT-216ENST00000522121 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
TOP1MT-216ENST00000522121 KRTAP9-6A8MVA2 160 aa5.4□□□□□ -1.54
TOP1MT-216ENST00000522121 KRTAP9-9Q9BYP9 154 aa5.37□□□□□ -1.55
TOP1MT-216ENST00000522121 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
TOP1MT-216ENST00000522121 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
TOP1MT-216ENST00000522121 SVIPQ8NHG7 77 aa5.17□□□□□ -1.58
TOP1MT-216ENST00000522121 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.58
TOP1MT-216ENST00000522121 MT3P25713 68 aa5.14□□□□□ -1.59
TOP1MT-216ENST00000522121 MUC5ACP98088 5654 aa5.13□□□□□ -1.59
TOP1MT-216ENST00000522121 AHNAKQ09666 5890 aaKnown RBP5.12□□□□□ -1.59
TOP1MT-216ENST00000522121 MUC5BQ9HC84 5762 aaPredicted RBP5.1□□□□□ -1.59
TOP1MT-216ENST00000522121 PCP4P48539 62 aa5.06□□□□□ -1.6
TOP1MT-216ENST00000522121 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
TOP1MT-216ENST00000522121 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
TOP1MT-216ENST00000522121 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
TOP1MT-216ENST00000522121 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
TOP1MT-216ENST00000522121 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
TOP1MT-216ENST00000522121 LCE1CQ5T751 118 aa4.39□□□□□ -1.71
TOP1MT-216ENST00000522121 PMAIP1Q13794 54 aa4.38□□□□□ -1.71
TOP1MT-216ENST00000522121 A0A0A0MQY5 61 aa4.26□□□□□ -1.73
TOP1MT-216ENST00000522121 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
TOP1MT-216ENST00000522121 LCE3DQ9BYE3 92 aa4.15□□□□□ -1.75
TOP1MT-216ENST00000522121 PRO0628Q9UI54 55 aa4□□□□□ -1.77
TOP1MT-216ENST00000522121 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
TOP1MT-216ENST00000522121 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.96□□□□□ -1.78
TOP1MT-216ENST00000522121 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
TOP1MT-216ENST00000522121 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
TOP1MT-216ENST00000522121 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
TOP1MT-216ENST00000522121 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
TOP1MT-216ENST00000522121 KRTAP21-2Q3LI59 83 aa3.64□□□□□ -1.83
TOP1MT-216ENST00000522121 PHGR1C9JFL3 82 aa3.59□□□□□ -1.83
TOP1MT-216ENST00000522121 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
TOP1MT-216ENST00000522121 NDUFAF8A1L188 74 aa3.35□□□□□ -1.87
TOP1MT-216ENST00000522121 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
TOP1MT-216ENST00000522121 PRM1P04553 51 aa2.81□□□□□ -1.96
TOP1MT-216ENST00000522121 KRTAP21-1Q3LI58 79 aa2.74□□□□□ -1.97
TOP1MT-216ENST00000522121 INE1O15225 51 aa2.45□□□□□ -2.02
TOP1MT-216ENST00000522121 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 72.7 ms