RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 SPINT4Q6UDR6 99 aa1.82□□□□□ -2.12
SGCE-211ENST00000522045 MUC17Q685J3 4493 aa1.82□□□□□ -2.12
SGCE-211ENST00000522045 DMBT1Q9UGM3 2413 aaPredicted RBP1.8□□□□□ -2.12
SGCE-211ENST00000522045 HERC1Q15751 4861 aa1.79□□□□□ -2.12
SGCE-211ENST00000522045 KIAA1109Q2LD37 5005 aa1.77□□□□□ -2.13
SGCE-211ENST00000522045 LPAP08519 4548 aa1.77□□□□□ -2.13
SGCE-211ENST00000522045 LRP2P98164 4655 aa1.76□□□□□ -2.13
SGCE-211ENST00000522045 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
SGCE-211ENST00000522045 R4GN34 69 aa1.75□□□□□ -2.13
SGCE-211ENST00000522045 EPPK1P58107 5090 aaKnown RBP1.75□□□□□ -2.13
SGCE-211ENST00000522045 FLGP20930 4061 aaPredicted RBP1.73□□□□□ -2.13
SGCE-211ENST00000522045 BIRC6Q9NR09 4857 aa1.72□□□□□ -2.13
SGCE-211ENST00000522045 ABCA13Q86UQ4 5058 aa1.7□□□□□ -2.14
SGCE-211ENST00000522045 HERC2O95714 4834 aa1.7□□□□□ -2.14
SGCE-211ENST00000522045 PLAC4Q8WY50 150 aa1.7□□□□□ -2.14
SGCE-211ENST00000522045 TNP1P09430 55 aa1.64□□□□□ -2.15
SGCE-211ENST00000522045 LUZP6Q538Z0 58 aa1.63□□□□□ -2.15
SGCE-211ENST00000522045 HMCN2Q8NDA2 5059 aa1.63□□□□□ -2.15
SGCE-211ENST00000522045 SPRR2GQ9BYE4 73 aa1.62□□□□□ -2.15
SGCE-211ENST00000522045 PCLOQ9Y6V0 5065 aa1.61□□□□□ -2.15
SGCE-211ENST00000522045 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
SGCE-211ENST00000522045 KRTAP8-1Q8IUC2 63 aa1.55□□□□□ -2.16
SGCE-211ENST00000522045 RNF213Q63HN8 5207 aa1.55□□□□□ -2.16
SGCE-211ENST00000522045 MT1HP80294 61 aa1.54□□□□□ -2.16
SGCE-211ENST00000522045 MT2AP02795 61 aa1.53□□□□□ -2.16
SGCE-211ENST00000522045 MT1FP04733 61 aa1.53□□□□□ -2.16
SGCE-211ENST00000522045 MT1BP07438 61 aa1.51□□□□□ -2.17
SGCE-211ENST00000522045 MT1XP80297 61 aa1.51□□□□□ -2.17
SGCE-211ENST00000522045 MUC2Q02817 5179 aa1.51□□□□□ -2.17
SGCE-211ENST00000522045 UBR4Q5T4S7 5183 aa1.5□□□□□ -2.17
SGCE-211ENST00000522045 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
SGCE-211ENST00000522045 PRO2289Q9P1D8 64 aa1.49□□□□□ -2.17
SGCE-211ENST00000522045 INE1O15225 51 aa1.48□□□□□ -2.17
SGCE-211ENST00000522045 M0R2T5 61 aa1.47□□□□□ -2.17
SGCE-211ENST00000522045 HMCN1Q96RW7 5635 aa1.46□□□□□ -2.18
SGCE-211ENST00000522045 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
SGCE-211ENST00000522045 KRTAP2-3P0C7H8 128 aa1.35□□□□□ -2.19
SGCE-211ENST00000522045 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
SGCE-211ENST00000522045 KRTAP2-4Q9BYR9 128 aa1.35□□□□□ -2.19
SGCE-211ENST00000522045 KRTAP2-1Q9BYU5 128 aa1.35□□□□□ -2.19
SGCE-211ENST00000522045 USH2AO75445 5202 aa1.33□□□□□ -2.2
SGCE-211ENST00000522045 MT1EP04732 61 aa1.31□□□□□ -2.2
SGCE-211ENST00000522045 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
SGCE-211ENST00000522045 MT1LQ93083 61 aa1.31□□□□□ -2.2
SGCE-211ENST00000522045 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
SGCE-211ENST00000522045 SSPOA2VEC9 5147 aa1.28□□□□□ -2.21
SGCE-211ENST00000522045 KMT2DO14686 5537 aa1.28□□□□□ -2.21
SGCE-211ENST00000522045 KRTAP19-6Q3LI70 58 aa1.26□□□□□ -2.21
SGCE-211ENST00000522045 KRTAP19-3Q7Z4W3 81 aa1.21□□□□□ -2.22
SGCE-211ENST00000522045 MT1MQ8N339 61 aa1.21□□□□□ -2.22
SGCE-211ENST00000522045 MT1GP13640 62 aa1.19□□□□□ -2.22
SGCE-211ENST00000522045 FSIP2Q5CZC0 6907 aa1.19□□□□□ -2.22
SGCE-211ENST00000522045 MACF1Q9UPN3 7388 aaKnown RBP1.16□□□□□ -2.22
SGCE-211ENST00000522045 MT1AP04731 61 aa1.14□□□□□ -2.23
SGCE-211ENST00000522045 MUC12Q9UKN1 5478 aa1.14□□□□□ -2.23
SGCE-211ENST00000522045 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.23
SGCE-211ENST00000522045 SPRR2FQ96RM1 72 aa1.09□□□□□ -2.23
SGCE-211ENST00000522045 SYNE2Q8WXH0 6885 aaKnown RBP1.09□□□□□ -2.24
SGCE-211ENST00000522045 MDN1Q9NU22 5596 aa1.06□□□□□ -2.24
SGCE-211ENST00000522045 NEBP20929 6669 aa1.05□□□□□ -2.24
SGCE-211ENST00000522045 SYNE1Q8NF91 8797 aaKnown RBP1.04□□□□□ -2.24
SGCE-211ENST00000522045 SPRR2EP22531 72 aa1.03□□□□□ -2.24
SGCE-211ENST00000522045 SPRR2BP35325 72 aa1.03□□□□□ -2.24
SGCE-211ENST00000522045 SPRR2AP35326 72 aa1.03□□□□□ -2.24
SGCE-211ENST00000522045 PRM1P04553 51 aa1.02□□□□□ -2.25
SGCE-211ENST00000522045 KRTAP6-2Q3LI66 62 aa1□□□□□ -2.25
SGCE-211ENST00000522045 DSTQ03001 7570 aaKnown RBP0.99□□□□□ -2.25
SGCE-211ENST00000522045 SPRR2DP22532 72 aa0.99□□□□□ -2.25
SGCE-211ENST00000522045 KRTAP20-1Q3LI63 56 aa0.88□□□□□ -2.27
SGCE-211ENST00000522045 MUC5ACP98088 5654 aa0.87□□□□□ -2.27
SGCE-211ENST00000522045 MT4P47944 62 aa0.87□□□□□ -2.27
SGCE-211ENST00000522045 KRTAP20-2Q3LI61 65 aa0.86□□□□□ -2.27
SGCE-211ENST00000522045 AHNAK2Q8IVF2 5795 aa0.81□□□□□ -2.28
SGCE-211ENST00000522045 GPR98Q8WXG9 6306 aa0.75□□□□□ -2.29
SGCE-211ENST00000522045 MUC5BQ9HC84 5762 aaPredicted RBP0.75□□□□□ -2.29
SGCE-211ENST00000522045 AHNAKQ09666 5890 aaKnown RBP0.7□□□□□ -2.3
SGCE-211ENST00000522045 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
SGCE-211ENST00000522045 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 113.7 ms