RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
VPS13B-210ENST00000521932 A0A0D9SG42 100 aa3.45□□□□□ -1.86
VPS13B-210ENST00000521932 UQCR11O14957 56 aa3.44□□□□□ -1.86
VPS13B-210ENST00000521932 KRTAP4-3Q9BYR4 195 aa3.44□□□□□ -1.86
VPS13B-210ENST00000521932 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
VPS13B-210ENST00000521932 PSPHP1O15172 72 aa3.41□□□□□ -1.86
VPS13B-210ENST00000521932 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
VPS13B-210ENST00000521932 SPINT4Q6UDR6 99 aa3.4□□□□□ -1.87
VPS13B-210ENST00000521932 MACF1Q9UPN3 7388 aaKnown RBP3.37□□□□□ -1.87
VPS13B-210ENST00000521932 MIR22HGQ0VDD5 57 aa3.36□□□□□ -1.87
VPS13B-210ENST00000521932 LCE3AQ5TA76 89 aa3.35□□□□□ -1.87
VPS13B-210ENST00000521932 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
VPS13B-210ENST00000521932 A6NED7 52 aa3.3□□□□□ -1.88
VPS13B-210ENST00000521932 KMT2DO14686 5537 aa3.3□□□□□ -1.88
VPS13B-210ENST00000521932 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
VPS13B-210ENST00000521932 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
VPS13B-210ENST00000521932 C10orf95Q9H7T3 257 aa3.26□□□□□ -1.89
VPS13B-210ENST00000521932 K7ERS5 55 aa3.25□□□□□ -1.89
VPS13B-210ENST00000521932 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
VPS13B-210ENST00000521932 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
VPS13B-210ENST00000521932 TNP1P09430 55 aa3.2□□□□□ -1.9
VPS13B-210ENST00000521932 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
VPS13B-210ENST00000521932 SPRR2FQ96RM1 72 aa3.18□□□□□ -1.9
VPS13B-210ENST00000521932 KRTAP25-1Q3LHN0 102 aa3.14□□□□□ -1.91
VPS13B-210ENST00000521932 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
VPS13B-210ENST00000521932 KRTAP19-7Q3SYF9 63 aa3.12□□□□□ -1.91
VPS13B-210ENST00000521932 MDN1Q9NU22 5596 aa3.1□□□□□ -1.91
VPS13B-210ENST00000521932 SPRR2EP22531 72 aa3.08□□□□□ -1.92
VPS13B-210ENST00000521932 SPRR2BP35325 72 aa3.08□□□□□ -1.92
VPS13B-210ENST00000521932 SPRR2AP35326 72 aa3.08□□□□□ -1.92
VPS13B-210ENST00000521932 ROMO1P60602 79 aa3.08□□□□□ -1.92
VPS13B-210ENST00000521932 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
VPS13B-210ENST00000521932 MT1EP04732 61 aa3.07□□□□□ -1.92
VPS13B-210ENST00000521932 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
VPS13B-210ENST00000521932 PRO0628Q9UI54 55 aa3.05□□□□□ -1.92
VPS13B-210ENST00000521932 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
VPS13B-210ENST00000521932 NEBP20929 6669 aa3.01□□□□□ -1.93
VPS13B-210ENST00000521932 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
VPS13B-210ENST00000521932 KRTAP12-3P60328 96 aa3□□□□□ -1.93
VPS13B-210ENST00000521932 PP632Q6XCG6 107 aa2.98□□□□□ -1.93
VPS13B-210ENST00000521932 MT1LQ93083 61 aa2.98□□□□□ -1.93
VPS13B-210ENST00000521932 MT1GP13640 62 aa2.97□□□□□ -1.93
VPS13B-210ENST00000521932 SPRR2DP22532 72 aa2.97□□□□□ -1.93
VPS13B-210ENST00000521932 KRTAP2-3P0C7H8 128 aa2.95□□□□□ -1.94
VPS13B-210ENST00000521932 KRTAP2-4Q9BYR9 128 aa2.95□□□□□ -1.94
VPS13B-210ENST00000521932 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
VPS13B-210ENST00000521932 PMAIP1Q13794 54 aa2.92□□□□□ -1.94
VPS13B-210ENST00000521932 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
VPS13B-210ENST00000521932 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
VPS13B-210ENST00000521932 MT1MQ8N339 61 aa2.91□□□□□ -1.94
VPS13B-210ENST00000521932 SPRR5A0A1B0GTR4 108 aa2.88□□□□□ -1.95
VPS13B-210ENST00000521932 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
VPS13B-210ENST00000521932 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
VPS13B-210ENST00000521932 DSTQ03001 7570 aaKnown RBP2.82□□□□□ -1.96
VPS13B-210ENST00000521932 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
VPS13B-210ENST00000521932 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
VPS13B-210ENST00000521932 MT4P47944 62 aa2.58□□□□□ -2
VPS13B-210ENST00000521932 MT1AP04731 61 aa2.53□□□□□ -2
VPS13B-210ENST00000521932 KRTAP12-4P60329 112 aa2.53□□□□□ -2
VPS13B-210ENST00000521932 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
VPS13B-210ENST00000521932 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
VPS13B-210ENST00000521932 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
VPS13B-210ENST00000521932 SYNE1Q8NF91 8797 aaKnown RBP2.45□□□□□ -2.02
VPS13B-210ENST00000521932 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
VPS13B-210ENST00000521932 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
VPS13B-210ENST00000521932 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
VPS13B-210ENST00000521932 KRTAP5-10Q6L8G5 202 aa2.32□□□□□ -2.04
VPS13B-210ENST00000521932 AHNAK2Q8IVF2 5795 aa2.27□□□□□ -2.05
VPS13B-210ENST00000521932 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
VPS13B-210ENST00000521932 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
VPS13B-210ENST00000521932 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
VPS13B-210ENST00000521932 MUC5BQ9HC84 5762 aaPredicted RBP1.84□□□□□ -2.12
VPS13B-210ENST00000521932 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
VPS13B-210ENST00000521932 INE1O15225 51 aa1.7□□□□□ -2.14
VPS13B-210ENST00000521932 PRM1P04553 51 aa1.58□□□□□ -2.16
VPS13B-210ENST00000521932 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
VPS13B-210ENST00000521932 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
VPS13B-210ENST00000521932 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 39.3 ms