RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 KRTAP4-3Q9BYR4 195 aa3.87□□□□□ -1.79
CLK4-206ENST00000520878 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
CLK4-206ENST00000520878 MT1GP13640 62 aa3.84□□□□□ -1.8
CLK4-206ENST00000520878 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.8
CLK4-206ENST00000520878 LOC100996750A0A140TA64 210 aa3.8□□□□□ -1.8
CLK4-206ENST00000520878 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
CLK4-206ENST00000520878 MACF1Q9UPN3 7388 aaKnown RBP3.79□□□□□ -1.8
CLK4-206ENST00000520878 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
CLK4-206ENST00000520878 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.81
CLK4-206ENST00000520878 SYNE2Q8WXH0 6885 aaKnown RBP3.76□□□□□ -1.81
CLK4-206ENST00000520878 INE1O15225 51 aa3.74□□□□□ -1.81
CLK4-206ENST00000520878 MT1MQ8N339 61 aa3.74□□□□□ -1.81
CLK4-206ENST00000520878 KRTAP19-4Q3LI73 84 aa3.73□□□□□ -1.81
CLK4-206ENST00000520878 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
CLK4-206ENST00000520878 SPRR2EP22531 72 aa3.62□□□□□ -1.83
CLK4-206ENST00000520878 SPRR2BP35325 72 aa3.62□□□□□ -1.83
CLK4-206ENST00000520878 SPRR2AP35326 72 aa3.62□□□□□ -1.83
CLK4-206ENST00000520878 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
CLK4-206ENST00000520878 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
CLK4-206ENST00000520878 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
CLK4-206ENST00000520878 KRTAP2-3P0C7H8 128 aa3.56□□□□□ -1.84
CLK4-206ENST00000520878 KRTAP2-4Q9BYR9 128 aa3.56□□□□□ -1.84
CLK4-206ENST00000520878 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
CLK4-206ENST00000520878 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
CLK4-206ENST00000520878 SPRR2DP22532 72 aa3.46□□□□□ -1.85
CLK4-206ENST00000520878 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
CLK4-206ENST00000520878 KRTAP12-4P60329 112 aa3.4□□□□□ -1.86
CLK4-206ENST00000520878 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
CLK4-206ENST00000520878 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
CLK4-206ENST00000520878 KRTAP9-6A0A140TA67 174 aa3.37□□□□□ -1.87
CLK4-206ENST00000520878 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
CLK4-206ENST00000520878 MT1AP04731 61 aa3.31□□□□□ -1.88
CLK4-206ENST00000520878 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
CLK4-206ENST00000520878 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
CLK4-206ENST00000520878 KRTAP4-6Q9BYQ5 205 aa3.19□□□□□ -1.9
CLK4-206ENST00000520878 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
CLK4-206ENST00000520878 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
CLK4-206ENST00000520878 MT4P47944 62 aa3.15□□□□□ -1.91
CLK4-206ENST00000520878 KRTAP6-2Q3LI66 62 aa3.12□□□□□ -1.91
CLK4-206ENST00000520878 KRTAP9-4Q9BYQ2 154 aa3.12□□□□□ -1.91
CLK4-206ENST00000520878 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
CLK4-206ENST00000520878 MT3P25713 68 aa3.09□□□□□ -1.92
CLK4-206ENST00000520878 NEBP20929 6669 aa3.03□□□□□ -1.92
CLK4-206ENST00000520878 PRM1P04553 51 aa2.97□□□□□ -1.93
CLK4-206ENST00000520878 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
CLK4-206ENST00000520878 LCE4AQ5TA78 99 aa2.84□□□□□ -1.95
CLK4-206ENST00000520878 KRTAP20-1Q3LI63 56 aa2.83□□□□□ -1.96
CLK4-206ENST00000520878 LCE1DQ5T752 114 aa2.83□□□□□ -1.96
CLK4-206ENST00000520878 KRTAP20-2Q3LI61 65 aa2.81□□□□□ -1.96
CLK4-206ENST00000520878 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
CLK4-206ENST00000520878 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
CLK4-206ENST00000520878 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
CLK4-206ENST00000520878 KRTAP4-12Q9BQ66 201 aa2.65□□□□□ -1.99
CLK4-206ENST00000520878 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
CLK4-206ENST00000520878 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
CLK4-206ENST00000520878 MUC5ACP98088 5654 aa2.54□□□□□ -2
CLK4-206ENST00000520878 KRTAP9-9Q9BYP9 154 aa2.51□□□□□ -2.01
CLK4-206ENST00000520878 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
CLK4-206ENST00000520878 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
CLK4-206ENST00000520878 LCE1EQ5T753 118 aa2.38□□□□□ -2.03
CLK4-206ENST00000520878 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
CLK4-206ENST00000520878 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CLK4-206ENST00000520878 KRTAP5-1Q6L8H4 278 aa2.27□□□□□ -2.05
CLK4-206ENST00000520878 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
CLK4-206ENST00000520878 KRTAP5-10Q6L8G5 202 aa2.21□□□□□ -2.05
CLK4-206ENST00000520878 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
CLK4-206ENST00000520878 KRTAP4-4Q9BYR3 166 aa2.2□□□□□ -2.06
CLK4-206ENST00000520878 MUC5BQ9HC84 5762 aaPredicted RBP2.19□□□□□ -2.06
CLK4-206ENST00000520878 GPR98Q8WXG9 6306 aa2.17□□□□□ -2.06
CLK4-206ENST00000520878 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
CLK4-206ENST00000520878 LCE1FQ5T754 118 aa2□□□□□ -2.09
CLK4-206ENST00000520878 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
CLK4-206ENST00000520878 KRTAP5-7Q6L8G8 165 aa1.96□□□□□ -2.1
CLK4-206ENST00000520878 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
CLK4-206ENST00000520878 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
CLK4-206ENST00000520878 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
CLK4-206ENST00000520878 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
CLK4-206ENST00000520878 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 125.5 ms