RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
SHPRH-208ENST00000520752 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
SHPRH-208ENST00000520752 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
SHPRH-208ENST00000520752 LCE3DQ9BYE3 92 aa3.24□□□□□ -1.89
SHPRH-208ENST00000520752 SPRR2GQ9BYE4 73 aa3.23□□□□□ -1.89
SHPRH-208ENST00000520752 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.9
SHPRH-208ENST00000520752 MT1HL1P0DM35 61 aa3.21□□□□□ -1.9
SHPRH-208ENST00000520752 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
SHPRH-208ENST00000520752 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
SHPRH-208ENST00000520752 MUC2Q02817 5179 aa3.2□□□□□ -1.9
SHPRH-208ENST00000520752 KRTAP19-2Q3LHN2 52 aa3.2□□□□□ -1.9
SHPRH-208ENST00000520752 LRP2P98164 4655 aa3.18□□□□□ -1.9
SHPRH-208ENST00000520752 KRTAP5-5Q701N2 237 aaPredicted RBP3.18□□□□□ -1.9
SHPRH-208ENST00000520752 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
SHPRH-208ENST00000520752 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
SHPRH-208ENST00000520752 FSIP2Q5CZC0 6907 aa3.13□□□□□ -1.91
SHPRH-208ENST00000520752 M0R2T5 61 aa3.12□□□□□ -1.91
SHPRH-208ENST00000520752 MUC17Q685J3 4493 aa3.09□□□□□ -1.92
SHPRH-208ENST00000520752 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
SHPRH-208ENST00000520752 LPAP08519 4548 aa3.06□□□□□ -1.92
SHPRH-208ENST00000520752 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
SHPRH-208ENST00000520752 OBSCNQ5VST9 7968 aa3.02□□□□□ -1.93
SHPRH-208ENST00000520752 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
SHPRH-208ENST00000520752 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
SHPRH-208ENST00000520752 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
SHPRH-208ENST00000520752 MT1XP80297 61 aa2.93□□□□□ -1.94
SHPRH-208ENST00000520752 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
SHPRH-208ENST00000520752 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
SHPRH-208ENST00000520752 MT1BP07438 61 aa2.82□□□□□ -1.96
SHPRH-208ENST00000520752 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SHPRH-208ENST00000520752 MT2AP02795 61 aa2.74□□□□□ -1.97
SHPRH-208ENST00000520752 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
SHPRH-208ENST00000520752 MT1FP04733 61 aa2.72□□□□□ -1.97
SHPRH-208ENST00000520752 SYNE2Q8WXH0 6885 aaKnown RBP2.7□□□□□ -1.98
SHPRH-208ENST00000520752 MT1EP04732 61 aa2.69□□□□□ -1.98
SHPRH-208ENST00000520752 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
SHPRH-208ENST00000520752 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
SHPRH-208ENST00000520752 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
SHPRH-208ENST00000520752 MT1HP80294 61 aa2.66□□□□□ -1.98
SHPRH-208ENST00000520752 MT1AP04731 61 aa2.65□□□□□ -1.99
SHPRH-208ENST00000520752 MT1LQ93083 61 aa2.65□□□□□ -1.99
SHPRH-208ENST00000520752 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.99
SHPRH-208ENST00000520752 KRTAP19-7Q3SYF9 63 aa2.6□□□□□ -1.99
SHPRH-208ENST00000520752 USH2AO75445 5202 aa2.6□□□□□ -1.99
SHPRH-208ENST00000520752 NEBP20929 6669 aa2.59□□□□□ -1.99
SHPRH-208ENST00000520752 PRM1P04553 51 aa2.59□□□□□ -1.99
SHPRH-208ENST00000520752 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
SHPRH-208ENST00000520752 KRTAP19-6Q3LI70 58 aa2.47□□□□□ -2.01
SHPRH-208ENST00000520752 KMT2DO14686 5537 aa2.46□□□□□ -2.02
SHPRH-208ENST00000520752 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
SHPRH-208ENST00000520752 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
SHPRH-208ENST00000520752 MT1GP13640 62 aa2.37□□□□□ -2.03
SHPRH-208ENST00000520752 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
SHPRH-208ENST00000520752 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
SHPRH-208ENST00000520752 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
SHPRH-208ENST00000520752 MT1MQ8N339 61 aa2.31□□□□□ -2.04
SHPRH-208ENST00000520752 SPRR2AP35326 72 aa2.3□□□□□ -2.04
SHPRH-208ENST00000520752 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SHPRH-208ENST00000520752 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
SHPRH-208ENST00000520752 SPRR2EP22531 72 aa2.28□□□□□ -2.04
SHPRH-208ENST00000520752 SPRR2BP35325 72 aa2.28□□□□□ -2.04
SHPRH-208ENST00000520752 KRTAP19-3Q7Z4W3 81 aa2.26□□□□□ -2.05
SHPRH-208ENST00000520752 SPRR2DP22532 72 aa2.21□□□□□ -2.06
SHPRH-208ENST00000520752 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
SHPRH-208ENST00000520752 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
SHPRH-208ENST00000520752 KRTAP5-10Q6L8G5 202 aa2.12□□□□□ -2.07
SHPRH-208ENST00000520752 DSTQ03001 7570 aaKnown RBP2.12□□□□□ -2.07
SHPRH-208ENST00000520752 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
SHPRH-208ENST00000520752 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
SHPRH-208ENST00000520752 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
SHPRH-208ENST00000520752 MT4P47944 62 aa1.98□□□□□ -2.09
SHPRH-208ENST00000520752 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
SHPRH-208ENST00000520752 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SHPRH-208ENST00000520752 MUC5ACP98088 5654 aa1.77□□□□□ -2.13
SHPRH-208ENST00000520752 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
SHPRH-208ENST00000520752 KRTAP20-2Q3LI61 65 aa1.7□□□□□ -2.14
SHPRH-208ENST00000520752 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
SHPRH-208ENST00000520752 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 43.1 ms