RNA–Protein interactions for RNA: ENST00000520495.5

MTCL1-209, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 2

Gene MTCL1, Length 3,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-209ENST00000520495 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
MTCL1-209ENST00000520495 MT1LQ93083 61 aa5.13□□□□□ -1.59
MTCL1-209ENST00000520495 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
MTCL1-209ENST00000520495 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
MTCL1-209ENST00000520495 MT1EP04732 61 aa5.04□□□□□ -1.6
MTCL1-209ENST00000520495 LCE2DQ5TA82 110 aaPredicted RBP5.03□□□□□ -1.6
MTCL1-209ENST00000520495 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
MTCL1-209ENST00000520495 KRTAP4-3Q9BYR4 195 aa4.98□□□□□ -1.61
MTCL1-209ENST00000520495 LOC100996750A0A140TA64 210 aa4.97□□□□□ -1.61
MTCL1-209ENST00000520495 MT1GP13640 62 aa4.87□□□□□ -1.63
MTCL1-209ENST00000520495 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
MTCL1-209ENST00000520495 SYNE1Q8NF91 8797 aaKnown RBP4.86□□□□□ -1.63
MTCL1-209ENST00000520495 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
MTCL1-209ENST00000520495 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
MTCL1-209ENST00000520495 OBSCNQ5VST9 7968 aa4.78□□□□□ -1.64
MTCL1-209ENST00000520495 MDN1Q9NU22 5596 aa4.75□□□□□ -1.65
MTCL1-209ENST00000520495 KRTAP9-2Q9BYQ4 174 aa4.74□□□□□ -1.65
MTCL1-209ENST00000520495 MT1MQ8N339 61 aa4.68□□□□□ -1.66
MTCL1-209ENST00000520495 KRTAP19-3Q7Z4W3 81 aa4.68□□□□□ -1.66
MTCL1-209ENST00000520495 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
MTCL1-209ENST00000520495 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
MTCL1-209ENST00000520495 MT1AP04731 61 aa4.57□□□□□ -1.68
MTCL1-209ENST00000520495 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
MTCL1-209ENST00000520495 PRM1P04553 51 aa4.55□□□□□ -1.68
MTCL1-209ENST00000520495 KRTAP5-5Q701N2 237 aaPredicted RBP4.52□□□□□ -1.69
MTCL1-209ENST00000520495 LCE3DQ9BYE3 92 aa4.51□□□□□ -1.69
MTCL1-209ENST00000520495 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
MTCL1-209ENST00000520495 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
MTCL1-209ENST00000520495 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
MTCL1-209ENST00000520495 KRTAP6-1Q3LI64 71 aa4.38□□□□□ -1.71
MTCL1-209ENST00000520495 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
MTCL1-209ENST00000520495 KRTAP9-6A0A140TA67 174 aa4.35□□□□□ -1.71
MTCL1-209ENST00000520495 SPRR2EP22531 72 aa4.33□□□□□ -1.72
MTCL1-209ENST00000520495 SPRR2BP35325 72 aa4.33□□□□□ -1.72
MTCL1-209ENST00000520495 SPRR2AP35326 72 aa4.33□□□□□ -1.72
MTCL1-209ENST00000520495 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
MTCL1-209ENST00000520495 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.26□□□□□ -1.73
MTCL1-209ENST00000520495 KRTAP6-2Q3LI66 62 aa4.25□□□□□ -1.73
MTCL1-209ENST00000520495 KRTAP2-2Q9BYT5 123 aa4.25□□□□□ -1.73
MTCL1-209ENST00000520495 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
MTCL1-209ENST00000520495 SPRR2DP22532 72 aa4.12□□□□□ -1.75
MTCL1-209ENST00000520495 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
MTCL1-209ENST00000520495 LCE1DQ5T752 114 aa3.99□□□□□ -1.77
MTCL1-209ENST00000520495 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
MTCL1-209ENST00000520495 NEBP20929 6669 aa3.98□□□□□ -1.77
MTCL1-209ENST00000520495 MT3P25713 68 aa3.81□□□□□ -1.8
MTCL1-209ENST00000520495 MT4P47944 62 aa3.81□□□□□ -1.8
MTCL1-209ENST00000520495 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.81
MTCL1-209ENST00000520495 KRTAP5-4Q6L8H1 288 aa3.71□□□□□ -1.82
MTCL1-209ENST00000520495 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
MTCL1-209ENST00000520495 HMCN1Q96RW7 5635 aa3.6□□□□□ -1.83
MTCL1-209ENST00000520495 LCE4AQ5TA78 99 aa3.59□□□□□ -1.84
MTCL1-209ENST00000520495 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
MTCL1-209ENST00000520495 KRTAP9-9Q9BYP9 154 aa3.5□□□□□ -1.85
MTCL1-209ENST00000520495 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
MTCL1-209ENST00000520495 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.86
MTCL1-209ENST00000520495 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.87
MTCL1-209ENST00000520495 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
MTCL1-209ENST00000520495 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
MTCL1-209ENST00000520495 KRTAP5-3Q6L8H2 238 aa3.33□□□□□ -1.88
MTCL1-209ENST00000520495 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
MTCL1-209ENST00000520495 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
MTCL1-209ENST00000520495 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
MTCL1-209ENST00000520495 KRTAP21-1Q3LI58 79 aa2.91□□□□□ -1.94
MTCL1-209ENST00000520495 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
MTCL1-209ENST00000520495 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
MTCL1-209ENST00000520495 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
MTCL1-209ENST00000520495 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
MTCL1-209ENST00000520495 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
MTCL1-209ENST00000520495 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
MTCL1-209ENST00000520495 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.97
MTCL1-209ENST00000520495 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
MTCL1-209ENST00000520495 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
MTCL1-209ENST00000520495 GPR98Q8WXG9 6306 aa2.57□□□□□ -2
MTCL1-209ENST00000520495 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
MTCL1-209ENST00000520495 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
MTCL1-209ENST00000520495 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
MTCL1-209ENST00000520495 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 75.4 ms