RNA–Protein interactions for RNA: ENST00000520177.5

G3BP1-208, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 1 (best)

Gene G3BP1, Length 2,700 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-208ENST00000520177 LCE2DQ5TA82 110 aaPredicted RBP4.91□□□□□ -1.62
G3BP1-208ENST00000520177 LOC100996750A0A140TA64 210 aa4.88□□□□□ -1.63
G3BP1-208ENST00000520177 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
G3BP1-208ENST00000520177 KRTAP19-6Q3LI70 58 aa4.81□□□□□ -1.64
G3BP1-208ENST00000520177 MT1GP13640 62 aa4.79□□□□□ -1.64
G3BP1-208ENST00000520177 KRTAP9-2Q9BYQ4 174 aa4.79□□□□□ -1.64
G3BP1-208ENST00000520177 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
G3BP1-208ENST00000520177 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
G3BP1-208ENST00000520177 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
G3BP1-208ENST00000520177 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
G3BP1-208ENST00000520177 MT1MQ8N339 61 aa4.67□□□□□ -1.66
G3BP1-208ENST00000520177 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
G3BP1-208ENST00000520177 KRTAP19-3Q7Z4W3 81 aa4.62□□□□□ -1.67
G3BP1-208ENST00000520177 MACF1Q9UPN3 7388 aaKnown RBP4.57□□□□□ -1.68
G3BP1-208ENST00000520177 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
G3BP1-208ENST00000520177 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
G3BP1-208ENST00000520177 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
G3BP1-208ENST00000520177 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
G3BP1-208ENST00000520177 LCE5AQ5TCM9 118 aa4.42□□□□□ -1.7
G3BP1-208ENST00000520177 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
G3BP1-208ENST00000520177 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
G3BP1-208ENST00000520177 MT1AP04731 61 aa4.33□□□□□ -1.72
G3BP1-208ENST00000520177 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
G3BP1-208ENST00000520177 MDN1Q9NU22 5596 aa4.29□□□□□ -1.72
G3BP1-208ENST00000520177 LCE3DQ9BYE3 92 aa4.29□□□□□ -1.72
G3BP1-208ENST00000520177 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.27□□□□□ -1.73
G3BP1-208ENST00000520177 KRTAP9-7A8MTY7 169 aa4.26□□□□□ -1.73
G3BP1-208ENST00000520177 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
G3BP1-208ENST00000520177 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
G3BP1-208ENST00000520177 KRTAP5-5Q701N2 237 aaPredicted RBP4.23□□□□□ -1.73
G3BP1-208ENST00000520177 PRM1P04553 51 aa4.21□□□□□ -1.74
G3BP1-208ENST00000520177 LCE1AQ5T7P2 110 aa4.12□□□□□ -1.75
G3BP1-208ENST00000520177 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
G3BP1-208ENST00000520177 SPRR2EP22531 72 aa4.06□□□□□ -1.76
G3BP1-208ENST00000520177 SPRR2BP35325 72 aa4.06□□□□□ -1.76
G3BP1-208ENST00000520177 SPRR2AP35326 72 aa4.06□□□□□ -1.76
G3BP1-208ENST00000520177 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
G3BP1-208ENST00000520177 KRTAP6-2Q3LI66 62 aa4.01□□□□□ -1.77
G3BP1-208ENST00000520177 NEBP20929 6669 aa3.94□□□□□ -1.78
G3BP1-208ENST00000520177 KRTAP9-4Q9BYQ2 154 aa3.94□□□□□ -1.78
G3BP1-208ENST00000520177 KRTAP4-6Q9BYQ5 205 aa3.93□□□□□ -1.78
G3BP1-208ENST00000520177 SPRR2DP22532 72 aa3.9□□□□□ -1.79
G3BP1-208ENST00000520177 MT3P25713 68 aa3.77□□□□□ -1.81
G3BP1-208ENST00000520177 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
G3BP1-208ENST00000520177 KRTAP5-4Q6L8H1 288 aa3.54□□□□□ -1.84
G3BP1-208ENST00000520177 KRTAP20-1Q3LI63 56 aa3.52□□□□□ -1.85
G3BP1-208ENST00000520177 MT4P47944 62 aa3.45□□□□□ -1.86
G3BP1-208ENST00000520177 HMCN1Q96RW7 5635 aa3.4□□□□□ -1.86
G3BP1-208ENST00000520177 LCE4AQ5TA78 99 aa3.4□□□□□ -1.87
G3BP1-208ENST00000520177 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
G3BP1-208ENST00000520177 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
G3BP1-208ENST00000520177 KRTAP20-2Q3LI61 65 aa3.32□□□□□ -1.88
G3BP1-208ENST00000520177 KRTAP5-3Q6L8H2 238 aa3.31□□□□□ -1.88
G3BP1-208ENST00000520177 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
G3BP1-208ENST00000520177 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
G3BP1-208ENST00000520177 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
G3BP1-208ENST00000520177 KRTAP5-10Q6L8G5 202 aa3.09□□□□□ -1.92
G3BP1-208ENST00000520177 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
G3BP1-208ENST00000520177 AHNAK2Q8IVF2 5795 aa2.99□□□□□ -1.93
G3BP1-208ENST00000520177 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
G3BP1-208ENST00000520177 KRTAP4-2Q9BYR5 136 aa2.92□□□□□ -1.94
G3BP1-208ENST00000520177 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
G3BP1-208ENST00000520177 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
G3BP1-208ENST00000520177 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
G3BP1-208ENST00000520177 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
G3BP1-208ENST00000520177 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
G3BP1-208ENST00000520177 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.66□□□□□ -1.98
G3BP1-208ENST00000520177 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
G3BP1-208ENST00000520177 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
G3BP1-208ENST00000520177 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
G3BP1-208ENST00000520177 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
G3BP1-208ENST00000520177 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
G3BP1-208ENST00000520177 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
G3BP1-208ENST00000520177 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
G3BP1-208ENST00000520177 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
G3BP1-208ENST00000520177 AHNAKQ09666 5890 aaKnown RBP2.2□□□□□ -2.06
G3BP1-208ENST00000520177 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
G3BP1-208ENST00000520177 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 107.4 ms