RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 VPS13CQ709C8 3753 aa0.36□□□□□ -2.35
HMGB1P46-201ENST00000520062 MUC5ACP98088 5654 aa0.36□□□□□ -2.35
HMGB1P46-201ENST00000520062 DNAH10Q8IVF4 4471 aa0.36□□□□□ -2.35
HMGB1P46-201ENST00000520062 UTRNP46939 3433 aa0.36□□□□□ -2.35
HMGB1P46-201ENST00000520062 TRRAPQ9Y4A5 3859 aa0.35□□□□□ -2.35
HMGB1P46-201ENST00000520062 MT1EP04732 61 aa0.35□□□□□ -2.35
HMGB1P46-201ENST00000520062 MT1HP80294 61 aa0.35□□□□□ -2.35
HMGB1P46-201ENST00000520062 VPS13AQ96RL7 3174 aa0.34□□□□□ -2.36
HMGB1P46-201ENST00000520062 USP34Q70CQ2 3546 aa0.33□□□□□ -2.36
HMGB1P46-201ENST00000520062 UNC80Q8N2C7 3258 aa0.33□□□□□ -2.36
HMGB1P46-201ENST00000520062 FAT3Q8TDW7 4589 aa0.33□□□□□ -2.36
HMGB1P46-201ENST00000520062 LRP1BQ9NZR2 4599 aa0.33□□□□□ -2.36
HMGB1P46-201ENST00000520062 APOBP04114 4563 aaKnown RBP0.32□□□□□ -2.36
HMGB1P46-201ENST00000520062 PCNTO95613 3336 aa0.32□□□□□ -2.36
HMGB1P46-201ENST00000520062 MT1LQ93083 61 aa0.32□□□□□ -2.36
HMGB1P46-201ENST00000520062 SPEGQ15772 3267 aa0.32□□□□□ -2.36
HMGB1P46-201ENST00000520062 EP400Q96L91 3159 aa0.31□□□□□ -2.36
HMGB1P46-201ENST00000520062 MYO15AQ9UKN7 3530 aa0.3□□□□□ -2.36
HMGB1P46-201ENST00000520062 MACF1Q9UPN3 7388 aaKnown RBP0.29□□□□□ -2.36
HMGB1P46-201ENST00000520062 DNAH17Q9UFH2 4485 aa0.29□□□□□ -2.36
HMGB1P46-201ENST00000520062 GOLGB1Q14789 3259 aaKnown RBP0.28□□□□□ -2.36
HMGB1P46-201ENST00000520062 FAT1Q14517 4588 aa0.28□□□□□ -2.37
HMGB1P46-201ENST00000520062 VCANP13611 3396 aa0.27□□□□□ -2.37
HMGB1P46-201ENST00000520062 DEFB4AO15263 64 aa0.26□□□□□ -2.37
HMGB1P46-201ENST00000520062 SYNE2Q8WXH0 6885 aaKnown RBP0.26□□□□□ -2.37
HMGB1P46-201ENST00000520062 KMT2DO14686 5537 aa0.25□□□□□ -2.37
HMGB1P46-201ENST00000520062 MT1XP80297 61 aa0.25□□□□□ -2.37
HMGB1P46-201ENST00000520062 SPRR2GQ9BYE4 73 aa0.25□□□□□ -2.37
HMGB1P46-201ENST00000520062 BRCA2P51587 3418 aa0.24□□□□□ -2.37
HMGB1P46-201ENST00000520062 FSIP2Q5CZC0 6907 aa0.24□□□□□ -2.37
HMGB1P46-201ENST00000520062 HMCN2Q8NDA2 5059 aa0.24□□□□□ -2.37
HMGB1P46-201ENST00000520062 HTN3P15516 51 aa0.24□□□□□ -2.37
HMGB1P46-201ENST00000520062 CENPFP49454 3210 aa0.24□□□□□ -2.37
HMGB1P46-201ENST00000520062 MUC17Q685J3 4493 aa0.24□□□□□ -2.37
HMGB1P46-201ENST00000520062 PLECQ15149 4684 aaKnown RBP0.23□□□□□ -2.37
HMGB1P46-201ENST00000520062 LRP2P98164 4655 aa0.22□□□□□ -2.37
HMGB1P46-201ENST00000520062 DNAH14Q0VDD8 3507 aa0.22□□□□□ -2.37
HMGB1P46-201ENST00000520062 DNAH5Q8TE73 4624 aa0.22□□□□□ -2.38
HMGB1P46-201ENST00000520062 WDFY3Q8IZQ1 3526 aa0.21□□□□□ -2.38
HMGB1P46-201ENST00000520062 DYNC1H1Q14204 4646 aaKnown RBP0.21□□□□□ -2.38
HMGB1P46-201ENST00000520062 DSTQ03001 7570 aaKnown RBP0.2□□□□□ -2.38
HMGB1P46-201ENST00000520062 STARD9Q9P2P6 4700 aa0.16□□□□□ -2.38
HMGB1P46-201ENST00000520062 MUC12Q9UKN1 5478 aa0.16□□□□□ -2.38
HMGB1P46-201ENST00000520062 KRTAP19-8Q3LI54 63 aa0.16□□□□□ -2.38
HMGB1P46-201ENST00000520062 NEBP20929 6669 aa0.15□□□□□ -2.38
HMGB1P46-201ENST00000520062 MT2AP02795 61 aa0.15□□□□□ -2.39
HMGB1P46-201ENST00000520062 MT1HL1P0DM35 61 aa0.15□□□□□ -2.39
HMGB1P46-201ENST00000520062 MT1MQ8N339 61 aa0.15□□□□□ -2.39
HMGB1P46-201ENST00000520062 SSPOA2VEC9 5147 aa0.15□□□□□ -2.39
HMGB1P46-201ENST00000520062 PCLOQ9Y6V0 5065 aa0.14□□□□□ -2.39
HMGB1P46-201ENST00000520062 MT1GP13640 62 aa0.13□□□□□ -2.39
HMGB1P46-201ENST00000520062 KRTAP19-7Q3SYF9 63 aa0.13□□□□□ -2.39
HMGB1P46-201ENST00000520062 HERC1Q15751 4861 aa0.12□□□□□ -2.39
HMGB1P46-201ENST00000520062 KRTAP6-1Q3LI64 71 aa0.11□□□□□ -2.39
HMGB1P46-201ENST00000520062 KMT2CQ8NEZ4 4911 aaKnown RBP0.1□□□□□ -2.39
HMGB1P46-201ENST00000520062 CDH23Q9H251 3354 aa0.08□□□□□ -2.4
HMGB1P46-201ENST00000520062 HYDINQ4G0P3 5121 aa0.06□□□□□ -2.4
HMGB1P46-201ENST00000520062 DNHD1Q96M86 4753 aa0.06□□□□□ -2.4
HMGB1P46-201ENST00000520062 UBR4Q5T4S7 5183 aa0.05□□□□□ -2.4
HMGB1P46-201ENST00000520062 RYR3Q15413 4870 aa0.04□□□□□ -2.4
HMGB1P46-201ENST00000520062 MUC2Q02817 5179 aa0.04□□□□□ -2.4
HMGB1P46-201ENST00000520062 USH2AO75445 5202 aa0.04□□□□□ -2.4
HMGB1P46-201ENST00000520062 MT1FP04733 61 aa0.04□□□□□ -2.4
HMGB1P46-201ENST00000520062 MT1BP07438 61 aa0.04□□□□□ -2.4
HMGB1P46-201ENST00000520062 KRTAP19-2Q3LHN2 52 aa0.03□□□□□ -2.4
HMGB1P46-201ENST00000520062 RYR1P21817 5038 aa0.03□□□□□ -2.41
HMGB1P46-201ENST00000520062 MT4P47944 62 aa0.02□□□□□ -2.41
HMGB1P46-201ENST00000520062 RNF213Q63HN8 5207 aa0.01□□□□□ -2.41
HMGB1P46-201ENST00000520062 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
HMGB1P46-201ENST00000520062 KIAA1109Q2LD37 5005 aa-0.01□□□□□ -2.41
HMGB1P46-201ENST00000520062 RYR2Q92736 4967 aa-0.02□□□□□ -2.41
HMGB1P46-201ENST00000520062 ABCA13Q86UQ4 5058 aa-0.03□□□□□ -2.41
HMGB1P46-201ENST00000520062 KRTAP20-2Q3LI61 65 aa-0.03□□□□□ -2.41
HMGB1P46-201ENST00000520062 HERC2O95714 4834 aa-0.04□□□□□ -2.42
HMGB1P46-201ENST00000520062 BIRC6Q9NR09 4857 aa-0.04□□□□□ -2.42
HMGB1P46-201ENST00000520062 KRTAP20-1Q3LI63 56 aa-0.16□□□□□ -2.44
HMGB1P46-201ENST00000520062 KRTAP19-6Q3LI70 58 aa-0.25□□□□□ -2.45
Retrieved 77 of 20,778 RNA–protein pairs in 149.9 ms