RNA–Protein interactions for RNA: ENST00000519824.6

FAM49B-215, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM49B, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-215ENST00000519824 INE1O15225 51 aa4.4□□□□□ -1.7
FAM49B-215ENST00000519824 MT1GP13640 62 aa4.36□□□□□ -1.71
FAM49B-215ENST00000519824 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
FAM49B-215ENST00000519824 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
FAM49B-215ENST00000519824 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
FAM49B-215ENST00000519824 MT1EP04732 61 aa4.25□□□□□ -1.73
FAM49B-215ENST00000519824 MT1LQ93083 61 aa4.25□□□□□ -1.73
FAM49B-215ENST00000519824 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
FAM49B-215ENST00000519824 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
FAM49B-215ENST00000519824 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
FAM49B-215ENST00000519824 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
FAM49B-215ENST00000519824 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
FAM49B-215ENST00000519824 MDN1Q9NU22 5596 aa4.07□□□□□ -1.76
FAM49B-215ENST00000519824 SPRR2EP22531 72 aa4.05□□□□□ -1.76
FAM49B-215ENST00000519824 SPRR2BP35325 72 aa4.05□□□□□ -1.76
FAM49B-215ENST00000519824 SPRR2AP35326 72 aa4.05□□□□□ -1.76
FAM49B-215ENST00000519824 MT1MQ8N339 61 aa4.04□□□□□ -1.76
FAM49B-215ENST00000519824 KRTAP4-9Q9BYQ8 210 aa3.99□□□□□ -1.77
FAM49B-215ENST00000519824 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
FAM49B-215ENST00000519824 SPRR2DP22532 72 aa3.84□□□□□ -1.79
FAM49B-215ENST00000519824 KRTAP2-3P0C7H8 128 aa3.76□□□□□ -1.81
FAM49B-215ENST00000519824 KRTAP2-4Q9BYR9 128 aa3.76□□□□□ -1.81
FAM49B-215ENST00000519824 KRTAP2-1Q9BYU5 128 aa3.76□□□□□ -1.81
FAM49B-215ENST00000519824 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
FAM49B-215ENST00000519824 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
FAM49B-215ENST00000519824 LCE1AQ5T7P2 110 aa3.71□□□□□ -1.82
FAM49B-215ENST00000519824 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
FAM49B-215ENST00000519824 MT4P47944 62 aa3.65□□□□□ -1.82
FAM49B-215ENST00000519824 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
FAM49B-215ENST00000519824 KRTAP9-6A0A140TA67 174 aa3.58□□□□□ -1.84
FAM49B-215ENST00000519824 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
FAM49B-215ENST00000519824 LCE3EQ5T5B0 92 aa3.53□□□□□ -1.84
FAM49B-215ENST00000519824 MT1AP04731 61 aa3.52□□□□□ -1.85
FAM49B-215ENST00000519824 PRM1P04553 51 aa3.48□□□□□ -1.85
FAM49B-215ENST00000519824 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
FAM49B-215ENST00000519824 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
FAM49B-215ENST00000519824 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
FAM49B-215ENST00000519824 MT3P25713 68 aa3.36□□□□□ -1.87
FAM49B-215ENST00000519824 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
FAM49B-215ENST00000519824 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
FAM49B-215ENST00000519824 NEBP20929 6669 aa3.32□□□□□ -1.88
FAM49B-215ENST00000519824 KRTAP9-4Q9BYQ2 154 aa3.31□□□□□ -1.88
FAM49B-215ENST00000519824 KRTAP4-6Q9BYQ5 205 aa3.3□□□□□ -1.88
FAM49B-215ENST00000519824 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
FAM49B-215ENST00000519824 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
FAM49B-215ENST00000519824 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
FAM49B-215ENST00000519824 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
FAM49B-215ENST00000519824 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
FAM49B-215ENST00000519824 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
FAM49B-215ENST00000519824 KRTAP2-2Q9BYT5 123 aa3.01□□□□□ -1.93
FAM49B-215ENST00000519824 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
FAM49B-215ENST00000519824 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
FAM49B-215ENST00000519824 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
FAM49B-215ENST00000519824 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
FAM49B-215ENST00000519824 KRTAP4-11Q9BYQ6 195 aa2.73□□□□□ -1.97
FAM49B-215ENST00000519824 KRTAP9-9Q9BYP9 154 aa2.7□□□□□ -1.98
FAM49B-215ENST00000519824 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
FAM49B-215ENST00000519824 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
FAM49B-215ENST00000519824 LCE1EQ5T753 118 aa2.66□□□□□ -1.98
FAM49B-215ENST00000519824 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
FAM49B-215ENST00000519824 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
FAM49B-215ENST00000519824 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
FAM49B-215ENST00000519824 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
FAM49B-215ENST00000519824 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
FAM49B-215ENST00000519824 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
FAM49B-215ENST00000519824 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
FAM49B-215ENST00000519824 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
FAM49B-215ENST00000519824 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
FAM49B-215ENST00000519824 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
FAM49B-215ENST00000519824 KRTAP21-2Q3LI59 83 aa2.16□□□□□ -2.06
FAM49B-215ENST00000519824 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
FAM49B-215ENST00000519824 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
FAM49B-215ENST00000519824 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
FAM49B-215ENST00000519824 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
FAM49B-215ENST00000519824 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
FAM49B-215ENST00000519824 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
FAM49B-215ENST00000519824 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 194.9 ms