RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 Q5VV11 94 aa0.85□□□□□ -2.27
CCNC-208ENST00000519617 PLAC4Q8WY50 150 aa0.85□□□□□ -2.27
CCNC-208ENST00000519617 FAT4Q6V0I7 4981 aa0.85□□□□□ -2.27
CCNC-208ENST00000519617 MUC17Q685J3 4493 aa0.84□□□□□ -2.27
CCNC-208ENST00000519617 A6NED7 52 aa0.84□□□□□ -2.27
CCNC-208ENST00000519617 KRTAP19-2Q3LHN2 52 aa0.84□□□□□ -2.27
CCNC-208ENST00000519617 KTN1-AS1Q86SY8 53 aa0.84□□□□□ -2.27
CCNC-208ENST00000519617 CYSTM1Q9H1C7 97 aa0.84□□□□□ -2.27
CCNC-208ENST00000519617 PRO2289Q9P1D8 64 aa0.84□□□□□ -2.27
CCNC-208ENST00000519617 A6NN06 94 aa0.83□□□□□ -2.28
CCNC-208ENST00000519617 MIR22HGQ0VDD5 57 aa0.83□□□□□ -2.28
CCNC-208ENST00000519617 LINC01554Q52M75 96 aa0.83□□□□□ -2.28
CCNC-208ENST00000519617 FLGP20930 4061 aaPredicted RBP0.82□□□□□ -2.28
CCNC-208ENST00000519617 MT2AP02795 61 aa0.81□□□□□ -2.28
CCNC-208ENST00000519617 P0C880 135 aa0.81□□□□□ -2.28
CCNC-208ENST00000519617 KRTAP12-3P60328 96 aa0.81□□□□□ -2.28
CCNC-208ENST00000519617 SPINT4Q6UDR6 99 aa0.81□□□□□ -2.28
CCNC-208ENST00000519617 SPRR2GQ9BYE4 73 aa0.81□□□□□ -2.28
CCNC-208ENST00000519617 A0A0D9SG42 100 aa0.8□□□□□ -2.28
CCNC-208ENST00000519617 MT1FP04733 61 aa0.8□□□□□ -2.28
CCNC-208ENST00000519617 SPATA8Q6RVD6 105 aa0.8□□□□□ -2.28
CCNC-208ENST00000519617 BRK1Q8WUW1 75 aa0.8□□□□□ -2.28
CCNC-208ENST00000519617 CDC42SE1Q9NRR8 79 aa0.8□□□□□ -2.28
CCNC-208ENST00000519617 FSIP2Q5CZC0 6907 aa0.8□□□□□ -2.28
CCNC-208ENST00000519617 KRTAP25-1Q3LHN0 102 aa0.79□□□□□ -2.28
CCNC-208ENST00000519617 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
CCNC-208ENST00000519617 TNP1P09430 55 aa0.77□□□□□ -2.29
CCNC-208ENST00000519617 ROMO1P60602 79 aa0.77□□□□□ -2.29
CCNC-208ENST00000519617 KRTAP12-1P59990 96 aa0.76□□□□□ -2.29
CCNC-208ENST00000519617 KRTAP19-6Q3LI70 58 aa0.75□□□□□ -2.29
CCNC-208ENST00000519617 KRTAP13-4Q3LI77 160 aa0.75□□□□□ -2.29
CCNC-208ENST00000519617 MT1BP07438 61 aa0.74□□□□□ -2.29
CCNC-208ENST00000519617 C10orf95Q9H7T3 257 aa0.74□□□□□ -2.29
CCNC-208ENST00000519617 USH2AO75445 5202 aa0.72□□□□□ -2.29
CCNC-208ENST00000519617 MT1XP80297 61 aa0.72□□□□□ -2.29
CCNC-208ENST00000519617 KRTAP8-1Q8IUC2 63 aa0.72□□□□□ -2.29
CCNC-208ENST00000519617 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
CCNC-208ENST00000519617 AHNAK2Q8IVF2 5795 aa0.71□□□□□ -2.3
CCNC-208ENST00000519617 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
CCNC-208ENST00000519617 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
CCNC-208ENST00000519617 KRTAP6-3Q3LI67 103 aa0.69□□□□□ -2.3
CCNC-208ENST00000519617 SPRR2FQ96RM1 72 aa0.68□□□□□ -2.3
CCNC-208ENST00000519617 MT1GP13640 62 aa0.66□□□□□ -2.3
CCNC-208ENST00000519617 SPRR2EP22531 72 aa0.66□□□□□ -2.3
CCNC-208ENST00000519617 SPRR2BP35325 72 aa0.66□□□□□ -2.3
CCNC-208ENST00000519617 SPRR2AP35326 72 aa0.66□□□□□ -2.3
CCNC-208ENST00000519617 KRTAP19-5Q3LI72 72 aa0.65□□□□□ -2.31
CCNC-208ENST00000519617 KRTAP19-3Q7Z4W3 81 aa0.65□□□□□ -2.31
CCNC-208ENST00000519617 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
CCNC-208ENST00000519617 MT1EP04732 61 aa0.64□□□□□ -2.31
CCNC-208ENST00000519617 SPRR2DP22532 72 aa0.64□□□□□ -2.31
CCNC-208ENST00000519617 NEBP20929 6669 aa0.64□□□□□ -2.31
CCNC-208ENST00000519617 KRTAP19-7Q3SYF9 63 aa0.63□□□□□ -2.31
CCNC-208ENST00000519617 MT1LQ93083 61 aa0.63□□□□□ -2.31
CCNC-208ENST00000519617 KMT2DO14686 5537 aa0.63□□□□□ -2.31
CCNC-208ENST00000519617 GPR98Q8WXG9 6306 aa0.63□□□□□ -2.31
CCNC-208ENST00000519617 KRTAP2-3P0C7H8 128 aa0.62□□□□□ -2.31
CCNC-208ENST00000519617 KRTAP20-1Q3LI63 56 aa0.62□□□□□ -2.31
CCNC-208ENST00000519617 KRTAP2-4Q9BYR9 128 aa0.62□□□□□ -2.31
CCNC-208ENST00000519617 MT1MQ8N339 61 aa0.61□□□□□ -2.31
CCNC-208ENST00000519617 KRTAP2-1Q9BYU5 128 aa0.61□□□□□ -2.31
CCNC-208ENST00000519617 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
CCNC-208ENST00000519617 INE1O15225 51 aa0.6□□□□□ -2.31
CCNC-208ENST00000519617 MDN1Q9NU22 5596 aa0.59□□□□□ -2.31
CCNC-208ENST00000519617 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
CCNC-208ENST00000519617 DSTQ03001 7570 aaKnown RBP0.57□□□□□ -2.32
CCNC-208ENST00000519617 MT1AP04731 61 aa0.55□□□□□ -2.32
CCNC-208ENST00000519617 KRTAP5-10Q6L8G5 202 aa0.55□□□□□ -2.32
CCNC-208ENST00000519617 MT4P47944 62 aa0.53□□□□□ -2.32
CCNC-208ENST00000519617 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
CCNC-208ENST00000519617 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
CCNC-208ENST00000519617 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
CCNC-208ENST00000519617 KRTAP6-2Q3LI66 62 aa0.49□□□□□ -2.33
CCNC-208ENST00000519617 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
CCNC-208ENST00000519617 SYNE1Q8NF91 8797 aaKnown RBP0.43□□□□□ -2.34
CCNC-208ENST00000519617 PRM1P04553 51 aa0.37□□□□□ -2.35
CCNC-208ENST00000519617 PHGR1C9JFL3 82 aa0.31□□□□□ -2.36
CCNC-208ENST00000519617 KRTAP21-1Q3LI58 79 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 6.9 ms