RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
NUDCD1-203ENST00000519607 LCE3CQ5T5A8 94 aa4.19□□□□□ -1.74
NUDCD1-203ENST00000519607 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.74
NUDCD1-203ENST00000519607 LCE5AQ5TCM9 118 aa4.12□□□□□ -1.75
NUDCD1-203ENST00000519607 USH2AO75445 5202 aa4.08□□□□□ -1.76
NUDCD1-203ENST00000519607 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
NUDCD1-203ENST00000519607 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
NUDCD1-203ENST00000519607 FSIP2Q5CZC0 6907 aa4.04□□□□□ -1.76
NUDCD1-203ENST00000519607 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
NUDCD1-203ENST00000519607 KMT2DO14686 5537 aa3.96□□□□□ -1.78
NUDCD1-203ENST00000519607 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
NUDCD1-203ENST00000519607 SSPOA2VEC9 5147 aa3.94□□□□□ -1.78
NUDCD1-203ENST00000519607 MT1LQ93083 61 aa3.91□□□□□ -1.78
NUDCD1-203ENST00000519607 MT1EP04732 61 aa3.9□□□□□ -1.79
NUDCD1-203ENST00000519607 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
NUDCD1-203ENST00000519607 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
NUDCD1-203ENST00000519607 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
NUDCD1-203ENST00000519607 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
NUDCD1-203ENST00000519607 CRCT1Q9UGL9 99 aa3.83□□□□□ -1.8
NUDCD1-203ENST00000519607 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
NUDCD1-203ENST00000519607 MT1GP13640 62 aa3.68□□□□□ -1.82
NUDCD1-203ENST00000519607 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
NUDCD1-203ENST00000519607 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.82
NUDCD1-203ENST00000519607 MT1MQ8N339 61 aa3.65□□□□□ -1.83
NUDCD1-203ENST00000519607 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
NUDCD1-203ENST00000519607 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
NUDCD1-203ENST00000519607 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
NUDCD1-203ENST00000519607 MUC12Q9UKN1 5478 aa3.47□□□□□ -1.85
NUDCD1-203ENST00000519607 KRTAP12-4P60329 112 aa3.46□□□□□ -1.85
NUDCD1-203ENST00000519607 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
NUDCD1-203ENST00000519607 KRTAP5-9P26371 169 aa3.44□□□□□ -1.86
NUDCD1-203ENST00000519607 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
NUDCD1-203ENST00000519607 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
NUDCD1-203ENST00000519607 MT1AP04731 61 aa3.36□□□□□ -1.87
NUDCD1-203ENST00000519607 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
NUDCD1-203ENST00000519607 LCE1AQ5T7P2 110 aa3.31□□□□□ -1.88
NUDCD1-203ENST00000519607 SPRR2EP22531 72 aa3.3□□□□□ -1.88
NUDCD1-203ENST00000519607 SPRR2BP35325 72 aa3.3□□□□□ -1.88
NUDCD1-203ENST00000519607 SPRR2AP35326 72 aa3.3□□□□□ -1.88
NUDCD1-203ENST00000519607 KRTAP6-1Q3LI64 71 aa3.3□□□□□ -1.88
NUDCD1-203ENST00000519607 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
NUDCD1-203ENST00000519607 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
NUDCD1-203ENST00000519607 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.9
NUDCD1-203ENST00000519607 SPRR2DP22532 72 aa3.18□□□□□ -1.9
NUDCD1-203ENST00000519607 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
NUDCD1-203ENST00000519607 NEBP20929 6669 aa3.16□□□□□ -1.9
NUDCD1-203ENST00000519607 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
NUDCD1-203ENST00000519607 PRM1P04553 51 aa3.05□□□□□ -1.92
NUDCD1-203ENST00000519607 MT3P25713 68 aa3□□□□□ -1.93
NUDCD1-203ENST00000519607 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
NUDCD1-203ENST00000519607 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.93
NUDCD1-203ENST00000519607 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
NUDCD1-203ENST00000519607 MT4P47944 62 aa2.79□□□□□ -1.96
NUDCD1-203ENST00000519607 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
NUDCD1-203ENST00000519607 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
NUDCD1-203ENST00000519607 OBSCNQ5VST9 7968 aa2.72□□□□□ -1.97
NUDCD1-203ENST00000519607 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
NUDCD1-203ENST00000519607 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
NUDCD1-203ENST00000519607 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
NUDCD1-203ENST00000519607 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
NUDCD1-203ENST00000519607 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
NUDCD1-203ENST00000519607 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
NUDCD1-203ENST00000519607 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
NUDCD1-203ENST00000519607 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
NUDCD1-203ENST00000519607 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.04
NUDCD1-203ENST00000519607 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
NUDCD1-203ENST00000519607 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
NUDCD1-203ENST00000519607 KRTAP5-8O75690 187 aa2.26□□□□□ -2.05
NUDCD1-203ENST00000519607 KRTAP4-4Q9BYR3 166 aa2.22□□□□□ -2.05
NUDCD1-203ENST00000519607 GPR98Q8WXG9 6306 aa2.22□□□□□ -2.05
NUDCD1-203ENST00000519607 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
NUDCD1-203ENST00000519607 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
NUDCD1-203ENST00000519607 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
NUDCD1-203ENST00000519607 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
NUDCD1-203ENST00000519607 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
NUDCD1-203ENST00000519607 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
NUDCD1-203ENST00000519607 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
NUDCD1-203ENST00000519607 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 23.2 ms