RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
MRPS28-204ENST00000519120 HMCN1Q96RW7 5635 aa5.45□□□□□ -1.54
MRPS28-204ENST00000519120 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
MRPS28-204ENST00000519120 LINC01558Q9Y6Z2 57 aa5.39□□□□□ -1.55
MRPS28-204ENST00000519120 CCDC179H3BU77 68 aa5.37□□□□□ -1.55
MRPS28-204ENST00000519120 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
MRPS28-204ENST00000519120 KRTAP4-6Q9BYQ5 205 aa5.31□□□□□ -1.56
MRPS28-204ENST00000519120 UQCR11O14957 56 aa5.29□□□□□ -1.56
MRPS28-204ENST00000519120 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
MRPS28-204ENST00000519120 AHNAK2Q8IVF2 5795 aa5.26□□□□□ -1.57
MRPS28-204ENST00000519120 KRTAP5-10Q6L8G5 202 aa5.26□□□□□ -1.57
MRPS28-204ENST00000519120 TMEM258P61165 79 aa5.22□□□□□ -1.57
MRPS28-204ENST00000519120 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
MRPS28-204ENST00000519120 KRTAP5-5Q701N2 237 aaPredicted RBP5.19□□□□□ -1.58
MRPS28-204ENST00000519120 KRTAP19-4Q3LI73 84 aa5.15□□□□□ -1.59
MRPS28-204ENST00000519120 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
MRPS28-204ENST00000519120 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
MRPS28-204ENST00000519120 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
MRPS28-204ENST00000519120 KRTAP5-3Q6L8H2 238 aa5.12□□□□□ -1.59
MRPS28-204ENST00000519120 K7ERS5 55 aa5.09□□□□□ -1.59
MRPS28-204ENST00000519120 KRTAP5-7Q6L8G8 165 aa5.09□□□□□ -1.59
MRPS28-204ENST00000519120 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
MRPS28-204ENST00000519120 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
MRPS28-204ENST00000519120 PCP4P48539 62 aa5.03□□□□□ -1.6
MRPS28-204ENST00000519120 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
MRPS28-204ENST00000519120 V9GYY9 64 aa5□□□□□ -1.61
MRPS28-204ENST00000519120 SYNE1Q8NF91 8797 aaKnown RBP4.97□□□□□ -1.61
MRPS28-204ENST00000519120 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
MRPS28-204ENST00000519120 Q1T7F1 81 aa4.94□□□□□ -1.62
MRPS28-204ENST00000519120 PSPHP1O15172 72 aa4.92□□□□□ -1.62
MRPS28-204ENST00000519120 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
MRPS28-204ENST00000519120 SVIPQ8NHG7 77 aa4.83□□□□□ -1.64
MRPS28-204ENST00000519120 MT1AP04731 61 aa4.79□□□□□ -1.64
MRPS28-204ENST00000519120 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
MRPS28-204ENST00000519120 A6NED7 52 aa4.77□□□□□ -1.65
MRPS28-204ENST00000519120 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
MRPS28-204ENST00000519120 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
MRPS28-204ENST00000519120 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
MRPS28-204ENST00000519120 ROMO1P60602 79 aa4.7□□□□□ -1.66
MRPS28-204ENST00000519120 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
MRPS28-204ENST00000519120 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
MRPS28-204ENST00000519120 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
MRPS28-204ENST00000519120 KRTAP5-8O75690 187 aa4.56□□□□□ -1.68
MRPS28-204ENST00000519120 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
MRPS28-204ENST00000519120 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
MRPS28-204ENST00000519120 MUC5ACP98088 5654 aa4.41□□□□□ -1.7
MRPS28-204ENST00000519120 MT3P25713 68 aa4.39□□□□□ -1.71
MRPS28-204ENST00000519120 AHNAKQ09666 5890 aaKnown RBP4.36□□□□□ -1.71
MRPS28-204ENST00000519120 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
MRPS28-204ENST00000519120 MUC5BQ9HC84 5762 aaPredicted RBP4.35□□□□□ -1.71
MRPS28-204ENST00000519120 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
MRPS28-204ENST00000519120 PRO0628Q9UI54 55 aa4.11□□□□□ -1.75
MRPS28-204ENST00000519120 LCE1EQ5T753 118 aa4.1□□□□□ -1.75
MRPS28-204ENST00000519120 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
MRPS28-204ENST00000519120 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
MRPS28-204ENST00000519120 PMAIP1Q13794 54 aa3.88□□□□□ -1.79
MRPS28-204ENST00000519120 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
MRPS28-204ENST00000519120 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
MRPS28-204ENST00000519120 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
MRPS28-204ENST00000519120 KTN1-AS1Q86SY8 53 aa3.74□□□□□ -1.81
MRPS28-204ENST00000519120 H3BS24 57 aa3.57□□□□□ -1.84
MRPS28-204ENST00000519120 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
MRPS28-204ENST00000519120 LCE3DQ9BYE3 92 aa3.53□□□□□ -1.84
MRPS28-204ENST00000519120 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
MRPS28-204ENST00000519120 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
MRPS28-204ENST00000519120 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
MRPS28-204ENST00000519120 LCE3EQ5T5B0 92 aa3.3□□□□□ -1.88
MRPS28-204ENST00000519120 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
MRPS28-204ENST00000519120 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
MRPS28-204ENST00000519120 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
MRPS28-204ENST00000519120 NDUFAF8A1L188 74 aa3□□□□□ -1.93
MRPS28-204ENST00000519120 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
MRPS28-204ENST00000519120 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
MRPS28-204ENST00000519120 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
MRPS28-204ENST00000519120 INE1O15225 51 aa2.54□□□□□ -2
MRPS28-204ENST00000519120 PRM1P04553 51 aa2.37□□□□□ -2.03
MRPS28-204ENST00000519120 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
MRPS28-204ENST00000519120 MUC16Q8WXI7 14507 aa1.91□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 45.2 ms