RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 KRTAP19-4Q3LI73 84 aa4.41□□□□□ -1.7
PABPC1-208ENST00000519004 MT1LQ93083 61 aa4.39□□□□□ -1.71
PABPC1-208ENST00000519004 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
PABPC1-208ENST00000519004 MT1EP04732 61 aa4.29□□□□□ -1.72
PABPC1-208ENST00000519004 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
PABPC1-208ENST00000519004 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
PABPC1-208ENST00000519004 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
PABPC1-208ENST00000519004 USH2AO75445 5202 aa4.26□□□□□ -1.73
PABPC1-208ENST00000519004 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
PABPC1-208ENST00000519004 MT1GP13640 62 aa4.16□□□□□ -1.74
PABPC1-208ENST00000519004 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
PABPC1-208ENST00000519004 KRTAP9-7A8MTY7 169 aa4.11□□□□□ -1.75
PABPC1-208ENST00000519004 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
PABPC1-208ENST00000519004 PRM1P04553 51 aa4.08□□□□□ -1.76
PABPC1-208ENST00000519004 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
PABPC1-208ENST00000519004 KRTAP4-9Q9BYQ8 210 aa4.07□□□□□ -1.76
PABPC1-208ENST00000519004 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
PABPC1-208ENST00000519004 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
PABPC1-208ENST00000519004 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
PABPC1-208ENST00000519004 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
PABPC1-208ENST00000519004 MT1AP04731 61 aa3.99□□□□□ -1.77
PABPC1-208ENST00000519004 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
PABPC1-208ENST00000519004 MT1MQ8N339 61 aa3.96□□□□□ -1.77
PABPC1-208ENST00000519004 KRTAP4-2Q9BYR5 136 aa3.96□□□□□ -1.77
PABPC1-208ENST00000519004 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
PABPC1-208ENST00000519004 SYNE1Q8NF91 8797 aaKnown RBP3.96□□□□□ -1.78
PABPC1-208ENST00000519004 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
PABPC1-208ENST00000519004 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
PABPC1-208ENST00000519004 SSPOA2VEC9 5147 aa3.89□□□□□ -1.79
PABPC1-208ENST00000519004 KRTAP19-3Q7Z4W3 81 aa3.86□□□□□ -1.79
PABPC1-208ENST00000519004 FCGBPQ9Y6R7 5405 aaPredicted RBP3.8□□□□□ -1.8
PABPC1-208ENST00000519004 KRTAP4-11Q9BYQ6 195 aa3.79□□□□□ -1.8
PABPC1-208ENST00000519004 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
PABPC1-208ENST00000519004 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
PABPC1-208ENST00000519004 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
PABPC1-208ENST00000519004 FSIP2Q5CZC0 6907 aa3.71□□□□□ -1.82
PABPC1-208ENST00000519004 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
PABPC1-208ENST00000519004 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
PABPC1-208ENST00000519004 LCE1FQ5T754 118 aa3.65□□□□□ -1.82
PABPC1-208ENST00000519004 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
PABPC1-208ENST00000519004 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
PABPC1-208ENST00000519004 KRTAP19-6Q3LI70 58 aa3.58□□□□□ -1.84
PABPC1-208ENST00000519004 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
PABPC1-208ENST00000519004 SPRR2AP35326 72 aa3.34□□□□□ -1.87
PABPC1-208ENST00000519004 SYNE2Q8WXH0 6885 aaKnown RBP3.31□□□□□ -1.88
PABPC1-208ENST00000519004 SPRR2EP22531 72 aa3.29□□□□□ -1.88
PABPC1-208ENST00000519004 MACF1Q9UPN3 7388 aaKnown RBP3.29□□□□□ -1.88
PABPC1-208ENST00000519004 MT3P25713 68 aa3.21□□□□□ -1.9
PABPC1-208ENST00000519004 SPRR2BP35325 72 aa3.17□□□□□ -1.9
PABPC1-208ENST00000519004 SPRR2DP22532 72 aa3.16□□□□□ -1.9
PABPC1-208ENST00000519004 MDN1Q9NU22 5596 aa3.11□□□□□ -1.91
PABPC1-208ENST00000519004 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
PABPC1-208ENST00000519004 MUC5ACP98088 5654 aa2.88□□□□□ -1.95
PABPC1-208ENST00000519004 KRTAP5-10Q6L8G5 202 aa2.83□□□□□ -1.96
PABPC1-208ENST00000519004 KRTAP5-4Q6L8H1 288 aa2.77□□□□□ -1.97
PABPC1-208ENST00000519004 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
PABPC1-208ENST00000519004 NEBP20929 6669 aa2.72□□□□□ -1.97
PABPC1-208ENST00000519004 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
PABPC1-208ENST00000519004 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
PABPC1-208ENST00000519004 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
PABPC1-208ENST00000519004 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
PABPC1-208ENST00000519004 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
PABPC1-208ENST00000519004 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
PABPC1-208ENST00000519004 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
PABPC1-208ENST00000519004 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
PABPC1-208ENST00000519004 MT4P47944 62 aa2.46□□□□□ -2.02
PABPC1-208ENST00000519004 KRTAP21-2Q3LI59 83 aa2.39□□□□□ -2.03
PABPC1-208ENST00000519004 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
PABPC1-208ENST00000519004 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
PABPC1-208ENST00000519004 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
PABPC1-208ENST00000519004 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
PABPC1-208ENST00000519004 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
PABPC1-208ENST00000519004 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.11
PABPC1-208ENST00000519004 GPR98Q8WXG9 6306 aa1.8□□□□□ -2.12
PABPC1-208ENST00000519004 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
PABPC1-208ENST00000519004 AHNAKQ09666 5890 aaKnown RBP1.67□□□□□ -2.14
PABPC1-208ENST00000519004 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 15 ms